RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 HDXQ7Z353 690 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 WDSUB1Q8N9V3 476 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 CA5BP1Q8WTZ4 195 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SDCCAG3Q96C92 435 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 FAM120BQ96EK7 910 aaKnown RBP14.35□□□□□ -0.11
CCDC78-216ENST00000544996 DPY30Q9C005 99 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 NEUROD4Q9HD90 331 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SERHLQ9NQF3 203 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SDHAF3Q9NRP4 125 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 ZCCHC3Q9NUD5 404 aaKnown RBP14.35□□□□□ -0.11
CCDC78-216ENST00000544996 ABCG2Q9UNQ0 655 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
CCDC78-216ENST00000544996 SPTAN1Q13813 2472 aaKnown RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 HDAC3O15379 428 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 NKX2-2O95096 273 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 CLDN14O95500 239 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 ALOX5P09917 674 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 ENDOUP21128 410 aaKnown RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 HTR1EP28566 365 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PTGER4P35408 488 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 CCT3P49368 545 aaKnown RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PMPCAQ10713 525 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 MFSD12Q6NUT3 480 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 CAMKMTQ7Z624 323 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 FAM83FQ8NEG4 500 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 OR56A1Q8NGH5 318 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PSMA8Q8TAA3 256 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 ASB5Q8WWX0 329 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PIK3R3Q92569 461 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 JADE3Q92613 823 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 HOXB13Q92826 284 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 ARL8AQ96BM9 186 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 GIMAP5Q96F15 307 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 RMND5BQ96G75 393 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 ATP6V1G3Q96LB4 118 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 CHST11Q9NPF2 352 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 SIRT3Q9NTG7 399 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 FAM120CQ9NX05 1096 aaKnown RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PPP4R1LQ9P1A2 415 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 MARCOQ9UEW3 520 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-216ENST00000544996 PCDHGB4Q9UN71 923 aa14.34□□□□□ -0.11
CCDC78-216ENST00000544996 GXYLT2A0PJZ3 443 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 FAM47E-STBD1D6RA91 191 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SCO2O43819 266 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SOX30O94993 753 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 C6orf47O95873 294 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 KRT16P08779 473 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 KITP10721 976 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 MAP3K8P41279 467 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 ZNF630Q2M218 657 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 EIPR1Q53HC9 387 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 WIPI1Q5MNZ9 446 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 OGFOD2Q6N063 350 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 BHLHB9Q6PI77 547 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 YRDCQ86U90 279 aaKnown RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 PM20D2Q8IYS1 436 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SLC16A11Q8NCK7 471 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 VPS37AQ8NEZ2 397 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 OR4K17Q8NGC6 315 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 OR10Q1Q8NGQ4 319 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 OR14L1PQ8NHC6 308 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 FBXO30Q8TB52 745 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 NUDT8Q8WV74 236 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 RNF138Q8WVD3 245 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 MOAP1Q96BY2 351 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 C16orf58Q96GQ5 468 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 TIMP4Q99727 224 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 TTYH2Q9BSA4 534 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 TBL1XR1Q9BZK7 514 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 FAF1Q9UNN5 650 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SLC6A5Q9Y345 797 aa14.33□□□□□ -0.12
CCDC78-216ENST00000544996 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
CCDC78-216ENST00000544996 ICE1Q9Y2F5 2266 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 DIDO1Q9BTC0 2240 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 AHRRA9YTQ3 701 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 KLF11O14901 512 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 FADS1O60427 444 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 ACTL6AO96019 429 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 HMGN2P05204 90 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 ACP2P11117 423 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 SRD5A2P31213 254 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 DCTP40126 519 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 KIR3DL1P43629 444 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 CLNS1AP54105 237 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 GAS1P54826 345 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 OCRLQ01968 901 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 CRYZQ08257 329 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 TP53BP2Q13625 1128 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 LASP1Q14847 261 aaKnown RBP14.32□□□□□ -0.12
CCDC78-216ENST00000544996 DUSP5Q16690 384 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 NHSL2Q5HYW2 709 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 C1orf185Q5T7R7 199 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 ANXA8L1Q5VT79 327 aa14.32□□□□□ -0.12
CCDC78-216ENST00000544996 VASNQ6EMK4 673 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms