RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 SCARB2Q14108 478 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ARHGAP40Q5TG30 622 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MLIPQ5VWP3 458 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 FAHD1Q6P587 224 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ISLR2Q6UXK2 745 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 QSOX2Q6ZRP7 698 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 RAB11FIP2Q7L804 512 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TIPARPQ7Z3E1 657 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DEPDC4Q8N2C3 294 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 HORMAD2Q8N7B1 307 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ATG16L2Q8NAA4 619 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 STT3BQ8TCJ2 826 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MIPOL1Q8TD10 442 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SFXN5Q8TD22 340 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 GEMIN6Q8WXD5 167 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MAL2Q969L2 176 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 C16orf58Q96GQ5 468 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 C7orf34Q96L11 122 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 BBS4Q96RK4 519 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CMKLR1Q99788 373 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PSD2Q9BQI7 771 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SLC39A1Q9NY26 324 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DLL3Q9NYJ7 618 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 NDOR1Q9UHB4 597 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PSME2Q9UL46 239 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 C19orf53Q9UNZ5 99 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ENTPD4Q9Y227 616 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DTX4Q9Y2E6 619 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 FAM32AQ9Y421 112 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MMACHCQ9Y4U1 282 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 GMPPBQ9Y5P6 360 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 A0A087WV62 115 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 BLACEA4D250 179 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ARRDC5A6NEK1 342 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 HMGN4O00479 90 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 SLC30A4O14863 429 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 PLD2O14939 933 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 MPZL2O60487 215 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 KLF7O75840 302 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 DDAH2O95865 285 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 IGKV3-11P04433 115 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CCT3P49368 545 aaKnown RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 DAPP51397 102 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 HMGA2P52926 109 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 IST1P53990 364 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 VLDLRP98155 873 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CDK6Q00534 326 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 KCNC4Q03721 635 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 MAP4K2Q12851 820 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 NPRL3Q12980 569 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 GPR107Q5VW38 600 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 MFSD12Q6NUT3 480 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 FAM199XQ6PEV8 388 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 OVCH1Q7RTY7 1134 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 C6orf120Q7Z4R8 191 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 TMEM179BQ7Z7N9 219 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CYP4Z1Q86W10 505 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 SAMD14Q8IZD0 417 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF321PQ8N8H1 164 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 LSM14AQ8ND56 463 aaKnown RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 GIPC3Q8TF64 312 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 FCGR1BQ92637 280 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 OTUB1Q96FW1 271 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 TPD52L3Q96J77 140 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 PITX2Q99697 317 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 WDR77Q9BQA1 342 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 DDA1Q9BW61 102 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 GABARAPL3Q9BY60 117 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ALOXE3Q9BYJ1 711 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 DUSP21Q9H596 190 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF556Q9HAH1 456 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 PALMDQ9NP74 551 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 MKKSQ9NPJ1 570 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 PRTFDC1Q9NRG1 225 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ZCCHC3Q9NUD5 404 aaKnown RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CDC14AQ9UNH5 594 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ABCG2Q9UNQ0 655 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CLCA2Q9UQC9 943 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 POFUT2Q9Y2G5 429 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 MAGED1Q9Y5V3 778 aaPredicted RBP6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 KCNE3Q9Y6H6 103 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF780BQ9Y6R6 833 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 U3KQV3 271 aa6.51□□□□□ -1.37
HMGCS2-204ENST00000544913 CCDC187A0A096LP49 1063 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF99A8MXY4 864 aaPredicted RBP6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 H3BMQ9 156 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 TPD52L2O43399 206 aaKnown RBP6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 BCL10O95999 233 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 UMODP07911 640 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 ARAFP10398 606 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 ACP2P11117 423 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 CDK4P11802 303 aa6.5□□□□□ -1.37
HMGCS2-204ENST00000544913 CEACAM1P13688 526 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms