RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LRRC70Q7Z2Q7 622 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GID4Q8IVV7 300 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 RNF113BQ8IZP6 322 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZBTB2Q8N680 514 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GFM1Q96RP9 751 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 EBF4Q9BQW3 602 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ASF1BQ9NVP2 202 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 DUS2Q9NX74 493 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 NARFQ9UHQ1 456 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF646O15015 1829 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ANKUB1A6NFN9 424 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 PDXKO00764 312 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 EREGO14944 169 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GOT2P00505 430 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 FTLP02792 175 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ITGAVP06756 1048 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 RRASP10301 218 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 SLC2A4P14672 509 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 NOGQ13253 232 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 IRF3Q14653 427 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 KIAA0895LQ68EN5 471 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 LILRA6Q6PI73 481 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 TRAPPC5Q8IUR0 188 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZDHHC21Q8IVQ6 265 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GLB1L2Q8IW92 636 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GPALPP1Q8IXQ4 340 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 DHRSXQ8N5I4 330 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 FBXL13Q8NEE6 735 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 THAP6Q8TBB0 222 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZSCAN18Q8TBC5 510 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 TAS1R2Q8TE23 839 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 EDAQ92838 391 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 PCDHB18PQ96TA0 734 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ALKBH7Q9BT30 221 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 G6PC3Q9BUM1 346 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 CPEB1Q9BZB8 566 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 P2RY12Q9H244 342 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 CLMPQ9H6B4 373 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 MAB21L2Q9Y586 359 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 TMEM72A0PK05 275 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF195O14628 629 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 SSX4O60224 188 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ITGA10O75578 1167 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 CCNE2O96020 404 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 EGFP01133 1207 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 C2P06681 752 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 PNMTP11086 282 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 TNFRSF1AP19438 455 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 YWHAQP27348 245 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 RPS9P46781 194 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 HSPA7P48741 367 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 NR0B1P51843 470 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 MC2RQ01718 297 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 SLAMF1Q13291 335 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 GAMTQ14353 236 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 USP17L6PQ6QN14 398 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 MAVSQ7Z434 540 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 STPG2Q8N412 459 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 OR1L6Q8NGR2 347 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 FUBP1Q96AE4 644 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF599Q96NL3 588 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 F2RL3Q96RI0 385 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ASCL2Q99929 193 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 ISYNA1Q9NPH2 558 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 DDX4Q9NQI0 724 aaKnown RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 SIRT3Q9NTG7 399 aaPredicted RBP8.39□□□□□ -1.07
VPS13D-212ENST00000543766 HCN3Q9P1Z3 774 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 COMMD3Q9UBI1 195 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
VPS13D-212ENST00000543766 LANCL1O43813 399 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CPNE6O95741 557 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 C6orf47O95873 294 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 KLKB1P03952 638 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 FBXO45P0C2W1 286 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 UBCP0CG48 685 aaKnown RBP8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ANXA3P12429 323 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 B4GALT1P15291 398 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 AKAP5P24588 427 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 EPHB3P54753 998 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 AQP5P55064 265 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GTF2H2Q13888 395 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PTPRCAPQ14761 206 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GTF2H2CQ6P1K8 395 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 NPNTQ6UXI9 565 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 LYSMD2Q8IV50 215 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 OR51L1Q8NGJ5 315 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GPR151Q8TDV0 419 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ACOT12Q8WYK0 555 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 LENG9Q96B70 501 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 SMPD4Q9NXE4 827 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms