RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ACER2Q5QJU3 275 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 HEPHL1Q6MZM0 1159 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 LRRC74BQ6ZQY2 392 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 CALHM3Q86XJ0 350 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 APLFQ8IW19 511 aaPredicted RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 ULK2Q8IYT8 1036 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 ZNF614Q8N883 585 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 BCORP1Q8N888 145 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 ZNF527Q8NB42 609 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 CHDHQ8NE62 594 aaPredicted RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 FIG4Q92562 907 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 MAL2Q969L2 176 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 FAM162AQ96A26 154 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 EFHD2Q96C19 240 aaPredicted RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 LRGUKQ96M69 825 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 ZNF583Q96ND8 569 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 TRNT1Q96Q11 434 aaKnown RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 RASL10BQ96S79 203 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 SPATA5L1Q9BVQ7 753 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 CADM1Q9BY67 442 aaKnown RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 TRIM15Q9C019 465 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 HPF1Q9NWY4 346 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 SUCOQ9UBS9 1254 aaKnown RBP10.98□□□□□ -0.65
DDB1-223ENST00000543658 KCNMB2Q9Y691 235 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 KCNE3Q9Y6H6 103 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 APC2O95996 2303 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
DDB1-223ENST00000543658 NINQ8N4C6 2090 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 A0A0G2JPF8 293 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 HNRNPCL3B7ZW38 293 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 CXCR6O00574 342 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 TP53I11O14683 189 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 PPM1BO75688 479 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 IL33O95760 270 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 IFNA14P01570 189 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 CAPNS1P04632 268 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 TFPTP0C1Z6 253 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 HNRNPCL4P0DMR1 293 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 NAGAP17050 411 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 ITPKBP27987 946 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 LCN1P31025 176 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SOX3P41225 446 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 CLK3P49761 638 aaKnown RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 PNLIPRP2P54317 469 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 FOXK2Q01167 660 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 OC90Q02509 493 aaPredicted RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 CEACAM7Q14002 265 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 VEZF1Q14119 521 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 GPR68Q15743 365 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDB1-223ENST00000543658 LRRC23Q53EV4 343 aaPredicted RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 EXOSC6Q5RKV6 272 aaKnown RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 PRAMEF8Q5VWM4 474 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 PRAMEF7Q5VXH5 474 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 B3GNTL1Q67FW5 361 aaPredicted RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 H3F3CQ6NXT2 135 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 BORAQ6PGQ7 559 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 ISLR2Q6UXK2 745 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 C16orf47Q6ZP98 133 aaPredicted RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 ASRGL1Q7L266 308 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 GALNT10Q86SR1 603 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 PATL1Q86TB9 770 aaKnown RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 PTOV1Q86YD1 416 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 HPS6Q86YV9 775 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 PEX5LQ8IYB4 626 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 ZNF619Q8N2I2 560 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 C10orf111Q8N326 155 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 AMER2Q8N7J2 671 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 ANKFN1Q8N957 763 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 FAM156AQ8NDB6 213 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 FAM13CQ8NE31 585 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 OR4N2Q8NGD1 307 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SPPL2AQ8TCT8 520 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SLC38A5Q8WUX1 472 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 DIO2Q92813 273 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 TMCO6Q96DC7 493 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
DDB1-223ENST00000543658 CLPTM1LQ96KA5 538 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 COL21A1Q96P44 957 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SDF2Q99470 211 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 ZNF350Q9GZX5 532 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 STMN3Q9NZ72 180 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 SNX13Q9Y5W8 968 aa10.97□□□□□ -0.65
DDB1-223ENST00000543658 CFAP73A6NFT4 308 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 OR6C70A6NIJ9 312 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 SCDO00767 359 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 SERPINB7O75635 380 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 DNAJB5O75953 348 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.65
DDB1-223ENST00000543658 CHRM4P08173 479 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 GGT1P19440 569 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 AQP1P29972 269 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 GZMMP51124 257 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 SOX8P57073 446 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 FUT5Q11128 374 aa10.96□□□□□ -0.65
DDB1-223ENST00000543658 RPS26P11Q5JNZ5 115 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms