RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 EXOSC6Q5RKV6 272 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR5M10Q6IEU7 315 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ADGRE4PQ86SQ3 457 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MED12LQ86YW9 2145 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LACC1Q8IV20 430 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TRIM42Q8IWZ5 723 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PM20D2Q8IYS1 436 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FADS6Q8N9I5 356 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GIMAP5Q96F15 307 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 C3orf30Q96M34 536 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TSSK3Q96PN8 268 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PARD6BQ9BYG5 372 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 REEP4Q9H6H4 257 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CALHM2Q9HA72 323 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GIMAP2Q9UG22 337 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZDHHC2Q9UIJ5 367 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CBLCQ9ULV8 474 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CAMK2AQ9UQM7 478 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TMED5Q9Y3A6 229 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 L3MBTL1Q9Y468 752 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ABCA4P78363 2273 aa11.91□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MPDZO75970 2070 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GXYLT2A0PJZ3 443 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PDPK1O15530 556 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 AKAP10O43572 662 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IL33O95760 270 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IGKV1D-16P01601 117 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GRK2P25098 689 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IL12BP29460 328 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 EVI2BP34910 448 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SERPINB5P36952 375 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RPL38P63173 70 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF844Q08AG5 666 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TOMM20Q15388 145 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CLHC1Q8NHS4 586 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SH3GL2Q99962 352 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 DDX18Q9NVP1 670 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TAS2R10Q9NYW0 307 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RAB21Q9UL25 225 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR10H1Q9Y4A9 318 aa11.9□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NKX2-2O95096 273 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CHEK2O96017 543 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 STARP49675 285 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CLDN18P56856 261 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MRPS22P82650 360 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FBXL19-AS1Q494R0 122 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GALNTL6Q49A17 601 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TNFAIP8L3Q5GJ75 292 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SH2D4BQ5SQS7 431 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FAM110BQ8TC76 370 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TUBA1CQ9BQE3 449 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EML4Q9HC35 981 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SIRT3Q9NTG7 399 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ACSS1Q9NUB1 689 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FAM120CQ9NX05 1096 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SH3BP4Q9P0V3 963 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ATP6V1HQ9UI12 483 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ABCG2Q9UNQ0 655 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 NF1P21359 2839 aa11.89□□□□□ -0.51
TNFRSF1A-215ENST00000543359 IGLV3-32A0A0A0MS00 114 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PRPS2P11908 318 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CAPN3P20807 821 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 BMP5P22003 454 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DPP4P27487 766 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GABRA3P34903 492 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KRT20P35900 424 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ASMTP46597 345 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SERPINB4P48594 390 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MANFP55145 182 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CLDN15P56746 228 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HSPB3Q12988 150 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MPP2Q14168 576 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PTGR1Q14914 329 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MLC1Q15049 377 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SF3B4Q15427 424 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■□□ 17.8
TNFRSF1A-215ENST00000543359 DECR1Q16698 335 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EXOC3L1Q86VI1 746 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 IFNEQ86WN2 208 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 DDIASQ8IXT1 998 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR14L1PQ8NHC6 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms