RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ACP1P24666 158 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TMED10P49755 219 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 EMDP50402 254 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 NUBP1P53384 320 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 POU6F2P78424 691 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 RHAGQ02094 409 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNHIT3Q15649 155 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 MICAQ29983 383 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ANKRD34AQ69YU3 496 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TCTN3Q6NUS6 607 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 B3GNT6Q6ZMB0 384 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 COMTD1Q86VU5 262 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNF619Q8N2I2 560 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 RCBTB1Q8NDN9 531 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNF555Q8NEP9 628 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 OR7G1Q8NGA0 311 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 GIPC3Q8TF64 312 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 NR4A3Q92570 626 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 CNDP2Q96KP4 475 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 VSTM2LQ96N03 204 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 OR6C1Q96RD1 312 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ACER3Q9NUN7 267 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 FAM118AQ9NWS6 357 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 KIF17Q9P2E2 1029 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 RARRES3Q9UL19 164 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 FFAR1O14842 300 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SLC16A6O15403 523 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 FLRT2O43155 660 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 FCMRO60667 390 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 STX11O75558 287 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 GADD45GO95257 159 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 CDH2P19022 906 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 RCVRNP35243 200 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 YAP1P46937 504 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 CD300CQ08708 224 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 IL18R1Q13478 541 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 EXOC3L2Q2M3D2 409 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZIK1Q3SY52 487 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 COLEC12Q5KU26 742 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TCEAL6Q6IPX3 200 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ISLR2Q6UXK2 745 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 LACC1Q8IV20 430 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 OR10G2Q8NGC3 310 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 OR52P1PQ8NH57 321 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 VANGL1Q8TAA9 524 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 GPR151Q8TDV0 419 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TCEAL3Q969E4 200 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 PTCHD1Q96NR3 888 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TGIF2Q9GZN2 237 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNF443Q9Y2A4 671 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 GOLGA4Q13439 2230 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 COL27A1Q8IZC6 1860 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 TCRBV16S1A1N1A0A5B0 115 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 M0R3H8 397 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 HRKO00198 91 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SEMA7AO75326 666 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 LDOC1O95751 146 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 ONECUT2O95948 504 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 CLPSP04118 112 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 IFNA16P05015 189 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 HBQ1P09105 142 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 UBL4AP11441 157 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SSTR4P31391 388 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 GABRA3P34903 492 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 RORAP35398 523 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SMIM11AP58511 58 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 KCNAB2Q13303 367 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNF267Q14586 743 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 EIPR1Q53HC9 387 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 C1orf189Q5VU69 101 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 LAIR1Q6GTX8 287 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 DEF8Q6ZN54 512 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 RBM44Q6ZP01 1051 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 COX15Q7KZN9 410 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 VRK2Q86Y07 508 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ZNF615Q8N8J6 731 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ATG16L2Q8NAA4 619 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 PIK3C3Q8NEB9 887 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 PHF10Q8WUB8 498 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 PIK3R3Q92569 461 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 PRRC1Q96M27 445 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 NEURL2Q9BR09 285 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 QRSL1Q9H0R6 528 aaKnown RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
GNE-206ENST00000543356 TIMMDC1Q9NPL8 285 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 KRT84Q9NSB2 600 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 KLHL28Q9NXS3 571 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 PRODH2Q9UF12 536 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SLC13A4Q9UKG4 626 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 ERVK-19Q9WJR5 959 aa8.67□□□□□ -1.02
GNE-206ENST00000543356 SCN2AQ99250 2005 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 SMIM31A0A1B0GVY4 71 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 LNP1A1A4G5 178 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 OR2W5A6NFC9 320 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 AGAP5A6NIR3 686 aa8.66□□□□□ -1.02
GNE-206ENST00000543356 C17orf105B2RV13 164 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms