RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RAB7BQ96AH8 199 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 DUS3LQ96G46 650 aaKnown RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 OR2W5A6NFC9 320 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 GABARAPO95166 117 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 HK1P19367 917 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 EN2P19622 333 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 NTSR1P30989 418 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 MESP2Q0VG99 397 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 CNIH2Q6PI25 160 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 LCTLQ6UWM7 567 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 SLC44A3Q8N4M1 653 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 YIPF7Q8N8F6 280 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 NAXEQ8NCW5 288 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 CCL4L1Q8NHW4 92 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 APOOQ9BUR5 198 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 MVB12BQ9H7P6 319 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 ACER3Q9NUN7 267 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 WSB2Q9NYS7 404 aaPredicted RBP15.16■□□□□ 0.02
VARS2-212ENST00000542001 ITGB1BP2Q9UKP3 347 aa15.16■□□□□ 0.02
VARS2-212ENST00000542001 ZC3H12DA2A288 527 aaKnown RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 CPED1A4D0V7 1026 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 PUM1Q14671 1186 aaKnown RBP eCLIP15.15■□□□□ 0.02
VARS2-212ENST00000542001 BICRALQ6AI39 1079 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 AMER3Q8N944 861 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 CREB3L4Q8TEY5 395 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SPRYD4Q8WW59 207 aaPredicted RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 OR7D2Q96RA2 312 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 CDADC1Q9BWV3 514 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 TRIM2Q9C040 744 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 CDC14CA4D256 554 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 HPGDSO60760 199 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 DRD2P14416 443 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SDHBP21912 280 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SQSTM1Q13501 440 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 TBCEQ15813 527 aaPredicted RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 SFRP4Q6FHJ7 346 aaPredicted RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 SAMD14Q8IZD0 417 aaPredicted RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 BEST4Q8NFU0 473 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 OR6C4Q8NGE1 309 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 PPP1R14BQ96C90 147 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 Q9N2J8 555 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 TMEM45AQ9NWC5 275 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SPATA6Q9NWH7 488 aaPredicted RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 LOC102723532A0A0G2JNH3 316 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 PRKYO43930 277 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 GSTT2P0CG29 244 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 GSTT2BP0CG30 244 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 APEX1P27695 318 aaKnown RBP15.15■□□□□ 0.02
VARS2-212ENST00000542001 IL12BP29460 328 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 XAF1Q6GPH4 301 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 FAM71E1Q6IPT2 247 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SDR9C7Q8NEX9 313 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 TBL1XR1Q9BZK7 514 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 KLHL42Q9P2K6 505 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 SCN2AQ99250 2005 aa15.15■□□□□ 0.02
VARS2-212ENST00000542001 NCOR1O75376 2440 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 CNOT1A5YKK6 2376 aaKnown RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 POM121BA6NF01 834 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 FCMRO60667 390 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 OXSR1O95747 527 aaPredicted RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 TNFP01375 233 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 MAP2K3P46734 347 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 WNT4P56705 351 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 KCNJ8Q15842 424 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ALG10BQ5I7T1 473 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 NATD1Q8N6N6 113 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 PCNPQ8WW12 178 aaKnown RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 JSRP1Q96MG2 331 aaPredicted RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 MS4A8Q9BY19 250 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 UNC13CQ8NB66 2214 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 LOC105369274A0A096LPK9 316 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 KLHL18O94889 574 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ADH1BP00325 375 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 NDUFS1P28331 727 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 CXCR4P61073 352 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ENTPD8Q5MY95 495 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 C1orf189Q5VU69 101 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 MEDAGQ5VYS4 303 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 OR4N4Q8N0Y3 316 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 SYNPOQ8N3V7 929 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 OR2L5Q8NG80 312 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 OR6N2Q8NGY6 317 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 CHPT1Q8WUD6 406 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 COQ3Q9NZJ6 369 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 PIAS3Q9Y6X2 628 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 UNC119BA6NIH7 251 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 UPK1AO00322 258 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 HCRTR2O43614 444 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 SCO2O43819 266 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 MT-ND5P03915 603 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 RPS25P62851 125 aaKnown RBP15.14■□□□□ 0.01
VARS2-212ENST00000542001 CBLBQ13191 982 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 ZNF181Q2M3W8 571 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 PAMR1Q6UXH9 720 aa15.14■□□□□ 0.01
VARS2-212ENST00000542001 OR5K2Q8NHB8 316 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms