RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 POLE4Q9NR33 117 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 GRHPRQ9UBQ7 328 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PLXNA1Q9UIW2 1896 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 ZNF726A6NNF4 738 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 SMAD9O15198 467 aaKnown RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PROM1O43490 865 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 HMGN1P05114 100 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CSN2P05814 226 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 RETP07949 1114 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CD27P26842 260 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CHAF1BQ13112 559 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 ELOAQ14241 798 aaKnown RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 FGL2Q14314 439 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CEP78Q5JTW2 689 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 TCTE1Q5JU00 501 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 DCST2Q5T1A1 773 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 IL20RBQ6UXL0 311 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 SLC36A4Q6YBV0 504 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 IKBIPQ70UQ0 350 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PIWIL3Q7Z3Z3 882 aaKnown RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CPOQ8IVL8 374 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 POP5Q969H6 163 aaKnown RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 TAMM41Q96BW9 452 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 MS4A6EQ96DS6 147 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CDX2Q99626 313 aaPredicted RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 WDR77Q9BQA1 342 aaPredicted RBP8.96□□□□□ -0.98
TTC39C-203ENST00000540918 SDHAF3Q9NRP4 125 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 MGAT4BQ9UQ53 548 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 CFL2Q9Y281 166 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 ST14Q9Y5Y6 855 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 MED12Q93074 2177 aa8.96□□□□□ -0.98
TTC39C-203ENST00000540918 PLRG1O43660 514 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 KCNJ13O60928 360 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ABCB7O75027 752 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SCRG1O75711 98 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PPP1R3DO95685 299 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 C8BP07358 591 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SPARCP09486 303 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 EDNRAP25101 427 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 RORAP35398 523 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 GALK2Q01415 458 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SNTA1Q13424 505 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SMAD4Q13485 552 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PTGES3Q15185 160 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 RPTNQ6XPR3 784 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SERPINA11Q86U17 422 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 KLBQ86Z14 1044 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SLC30A8Q8IWU4 369 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 LINC01555Q8NAE3 123 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 UFD1Q92890 307 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ZMYND19Q96E35 227 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 NAA50Q9GZZ1 169 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 SPATA2Q9UM82 520 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PCDHGB5Q9Y5G0 923 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 A0A1W2PPC4 97 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 FOXE1O00358 373 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 AHCYL1O43865 530 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MPZL2O60487 215 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 GREM1O60565 184 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PKLRP30613 574 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 DBPQ10586 325 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 IL18R1Q13478 541 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 KLHL22Q53GT1 634 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 HMBOX1Q6NT76 420 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ZNF773Q6PK81 442 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 KDM8Q8N371 416 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 OR6T1Q8NGN1 323 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ZNF675Q8TD23 568 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 NEK7Q8TDX7 302 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 NSMAFQ92636 917 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 BEX2Q9BXY8 128 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 LDAHQ9H6V9 325 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MED20Q9H944 212 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 BEX1Q9HBH7 125 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ZSCAN32Q9NX65 697 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MRPL39Q9NYK5 338 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 CRNNQ9UBG3 495 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 IFT52Q9Y366 437 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 RBMX2Q9Y388 322 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 TDRD15B5MCY1 1934 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 CD8B2A6NJW9 211 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MBTPS2O43462 519 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ADAM23O75077 832 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 RENP00797 406 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 F13BP05160 661 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 DBIP07108 87 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 CD8BP10966 210 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 GSTM3P21266 225 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PIGAP37287 484 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 ZNF41P51814 821 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 PDX1P52945 283 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 RBM48Q5RL73 367 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MRPL2Q5T653 305 aaKnown RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 KLHL24Q6TFL4 600 aa8.95□□□□□ -0.98
TTC39C-203ENST00000540918 LSRQ86X29 649 aaPredicted RBP8.95□□□□□ -0.98
TTC39C-203ENST00000540918 MARVELD2Q8N4S9 558 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms