RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 SENP5Q96HI0 755 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ART5Q96L15 291 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 ZPBPQ9BS86 351 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PINK1Q9BXM7 581 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 SAP130Q9H0E3 1048 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 TRIM45Q9H8W5 580 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 CFL2Q9Y281 166 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 CLCA3PQ9Y6N3 262 aa13.23□□□□□ -0.29
CYB561A3-216ENST00000540755 PRAMEF25A6NGN4 478 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SYT5O00445 386 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SOCS2O14508 198 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 DENRO43583 198 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 RASAL1O95294 804 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 ZIC2O95409 532 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 DDAH2O95865 285 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 MT-CO3P00414 261 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 IGKV3-11P04433 115 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 KLK3P07288 261 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 HEXBP07686 556 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 PABPC4LP0CB38 370 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF28P17035 718 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 GABRA3P34903 492 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 TRHRP34981 398 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SLC37A1P57057 533 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 DCAF12Q5T6F0 453 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 HES3Q5TGS1 186 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 RAB11FIP2Q7L804 512 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 OR5K1Q8NHB7 308 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SLC2A12Q8TD20 617 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 PMEPA1Q969W9 287 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 RNF31Q96EP0 1072 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF300Q96RE9 604 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 ZNF347Q96SE7 839 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SPSB2Q99619 263 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 SLC29A1Q99808 456 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 RSPO3Q9BXY4 272 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 MTHFD2LQ9H903 347 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 WDR54Q9H977 334 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 NDUFAF4Q9P032 175 aa13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-216ENST00000540755 KALRNO60229 2985 aa13.21□□□□□ -0.29
CYB561A3-216ENST00000540755 GCN1Q92616 2671 aaKnown RBP13.21□□□□□ -0.29
CYB561A3-216ENST00000540755 A0A087WV48 116 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 IDSB3KWA1 339 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 FCMRO60667 390 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ALOX12BO75342 701 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 CSO75390 466 aaKnown RBP13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 STX11O75558 287 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 DNAJB5O75953 348 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 IFNW1P05000 195 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 RPSAP08865 295 aaKnown RBP13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ITIH1P19827 911 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 TNFRSF1BP20333 461 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 PRKAR1BP31321 381 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 EIF3IQ13347 325 aaKnown RBP13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 LCN10Q6JVE6 187 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 DHRS4L2Q6PKH6 230 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF517Q6ZMY9 492 aaPredicted RBP13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ZDHHC13Q8IUH4 622 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 GALNT4Q8N4A0 578 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 CBR4Q8N4T8 237 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 MORN4Q8NDC4 146 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF597Q96LX8 424 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 DDA1Q9BW61 102 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 Q9N2J8 555 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 IFT52Q9Y366 437 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 SH3GLB1Q9Y371 365 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.3
CYB561A3-216ENST00000540755 CCDC187A0A096LP49 1063 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 GXYLT2A0PJZ3 443 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 MAGEA13PA6NCF6 341 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 A8MUA0 341 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 PDLIM1O00151 329 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 ADAMDEC1O15204 470 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 KIAA0513O60268 411 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 BRINP1O60477 761 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 KCNK2O95069 426 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 LGI1O95970 557 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 THBS1P07996 1170 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 CT45A8P0DMV1 189 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 CT45A9P0DMV2 189 aa13.2□□□□□ -0.3
CYB561A3-216ENST00000540755 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms