RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 VEZF1Q14119 521 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CYP27C1Q4G0S4 372 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GPAT3Q53EU6 434 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 RPS26P11Q5JNZ5 115 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FCRLBQ6BAA4 426 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 INO80CQ6PI98 192 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PRR22Q8IZ63 422 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMEM102Q8N9M5 508 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 HIPK4Q8NE63 616 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FAM110BQ8TC76 370 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PSMF1Q92530 271 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 HSPBAP1Q96EW2 488 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 THOC3Q96J01 351 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TRNT1Q96Q11 434 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 POMPQ9Y244 141 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 POLHQ9Y253 713 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 KALRNO60229 2985 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FASNP49327 2511 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 COL6A6A6NMZ7 2263 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMEM247A6NEH6 219 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ACOX3O15254 700 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MAN1A2O60476 641 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FCMRO60667 390 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GCM2O75603 506 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NADKO95544 446 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 AK1P00568 194 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 RFX3P48380 749 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CRISP3P54108 245 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GLYATQ6IB77 296 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 REEP3Q6NUK4 255 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 H3F3CQ6NXT2 135 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZAR1Q86SH2 424 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ARMC10Q8N2F6 343 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 METTL25Q8N6Q8 603 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BCORP1Q8N888 145 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CLEC1AQ8NC01 280 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TNIP2Q8NFZ5 429 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BRIX1Q8TDN6 353 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FIG4Q92562 907 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ASB9Q96DX5 294 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SLC38A1Q9H2H9 487 aa17.46■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CFAP73A6NFT4 308 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 C5orf58C9J3I9 102 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CXCR6O00574 342 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ACOT8O14734 319 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ARPC2O15144 300 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GSTA4O15217 222 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 OR2J2O76002 312 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PGM3O95394 542 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ITGA3P26006 1051 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 AQP1P29972 269 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RRADP55042 308 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CHRNEQ04844 493 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 B3GNTL1Q67FW5 361 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PCSK4Q6UW60 755 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FRRS1Q6ZNA5 592 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LRRC74BQ6ZQY2 392 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RPS19BP1Q86WX3 136 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC5A8Q8N695 610 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SIRT6Q8N6T7 355 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TMBIM1Q969X1 311 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RAB3IPQ96QF0 476 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TREX2Q9BQ50 279 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZNF350Q9GZX5 532 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ING2Q9H160 280 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CDCP1Q9H5V8 836 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SNX13Q9Y5W8 968 aa17.45■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PIEZO2Q9H5I5 2752 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ABCD3P28288 659 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PCBP3P57721 371 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 AP2B1P63010 937 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GNA13Q14344 377 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DECR1Q16698 335 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TYW3Q6IPR3 259 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 JMJD6Q6NYC1 403 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC30A8Q8IWU4 369 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TAGAPQ8N103 731 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC34A3Q8N130 599 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 EFHD2Q96C19 240 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 OMA1Q96E52 524 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RASL10BQ96S79 203 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 BCL2L10Q9HD36 194 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ACTR3BQ9P1U1 418 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MAGEL2Q9UJ55 1249 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MKLN1Q9UL63 735 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 WDR45Q9Y484 360 aa17.44■□□□□ 0.38
TNFRSF1A-213ENST00000540022 STX11O75558 287 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ITGA10O75578 1167 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 IL33O95760 270 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NRG3P56975 720 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MLF1P58340 268 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 HPCAP84074 193 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PLCXD2Q0VAA5 305 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DEFB109BQ30KR1 87 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 INTS11Q5TA45 600 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DESI1Q6ICB0 168 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LYPD8Q6UX82 237 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FAM13CQ8NE31 585 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms