RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 GSDMCQ9BYG8 508 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 LRRC2Q9BYS8 371 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TRIM9Q9C026 710 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 POLR3FQ9H1D9 316 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GANQ9H2C0 597 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 MTIF3Q9H2K0 278 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 MRPL47Q9HD33 250 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 GSN-AS1Q9NRJ2 163 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RNF146Q9NTX7 359 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 POT1Q9NUX5 634 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SPHK1Q9NYA1 384 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 CISD1Q9NZ45 108 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 MTCH1Q9NZJ7 389 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 C1RLQ9NZP8 487 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RCC2Q9P258 522 aaKnown RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 KLHL13Q9P2N7 655 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC9A2Q9UBY0 812 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 TTC7AQ9ULT0 858 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 B3GALT5Q9Y2C3 310 aa3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 POLR3AO14802 1390 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 RP1L1Q8IWN7 2480 aaPredicted RBP3.48□□□□□ -1.85
AC055720.1-201ENST00000539552 MTORP42345 2549 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 USP9YO00507 2555 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NIPBLQ6KC79 2804 aaeCLIP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PPIAL4EA0A075B759 164 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 GSTTP1A0A1W2PQM5 241 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CASTOR2A6NHX0 329 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 M0R296 226 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 WWP2O00308 870 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 BCKDKO14874 412 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CHUKO15111 745 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ARPC1BO15143 372 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 STX7O15400 261 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NBR2O15453 112 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 JAK2O60674 1132 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 HCN1O60741 890 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 RGS11O94810 467 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 OR2F2O95006 317 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 OR5F1O95221 314 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 H6PDO95479 791 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PLAUP00749 431 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 IGLV2-14P01704 120 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ANXA4P09525 319 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PPIAL4FP0DN26 164 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 HAPLN1P10915 354 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CCL5P13501 91 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 B4GALT1P15291 398 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SSTR1P30872 391 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NBL1P41271 181 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CRATP43155 626 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 MAGEA9P43362 315 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SOX2P48431 317 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 KCNJ3P48549 501 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 POU3F4P49335 361 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC26A2P50443 739 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 TPMTP51580 245 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NR0B1P51843 470 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 HSF1Q00613 529 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PLOD1Q02809 727 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ZFP36L1Q07352 338 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SRSF4Q08170 494 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CRYZQ08257 329 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 BST2Q10589 180 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 FOXF2Q12947 444 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NFATC2Q13469 925 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 VEZF1Q14119 521 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM132DQ14C87 1099 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CAMK4Q16566 473 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ZSCAN26Q16670 478 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 RGS21Q2M5E4 152 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 KRTAP21-3Q3LHN1 58 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF528Q3MIS6 628 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 MOGAT2Q3SYC2 334 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CCDC14Q49A88 953 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SBK1Q52WX2 424 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SYT14P1Q58G82 188 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 KIAA0895LQ68EN5 471 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SNRNP48Q6IEG0 339 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CAPN13Q6MZZ7 669 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CCDC137Q6PK04 289 aaKnown RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NDUFAF7Q7L592 441 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ARHGAP22Q7Z5H3 698 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 LRRC6Q86X45 466 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 CDKL3Q8IVW4 592 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 SFTPA2Q8IWL1 248 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 GCSAMQ8N6F7 178 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PQLC3Q8N755 202 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 EMC1Q8N766 993 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 Q8N9P0 234 aaPredicted RBP3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 ERMNQ8TAM6 284 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 DTX3LQ8TDB6 740 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 PPP4R1Q8TF05 950 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 DNAAF4Q8WXU2 420 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 NRGNQ92686 78 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 MRGPRFQ96AM1 343 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM45BQ96B21 275 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 TM4SF19Q96DZ7 209 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 HPDLQ96IR7 371 aa3.47□□□□□ -1.85
AC055720.1-201ENST00000539552 TECTBQ96PL2 329 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms