RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 B4DXG7 233 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 PDPK1O15530 556 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 CTAG2O75638 210 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 CHEK2O96017 543 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 TCEA1P23193 301 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 STARP49675 285 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 LHX2P50458 406 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 AGFG1P52594 562 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 RPL38P63173 70 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 HSPB3Q12988 150 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 DECR1Q16698 335 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 KANK2Q63ZY3 851 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 ADGRE4PQ86SQ3 457 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 FADS6Q8N9I5 356 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 OR2T11Q8NH01 316 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 OR2W6PQ8NHA6 318 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 GFM2Q969S9 779 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 LMF2Q9BU23 707 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 ANKZF1Q9H8Y5 726 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 DNAJB12Q9NXW2 375 aaKnown RBP20.14■□□□□ 0.81
SCARB1-206ENST00000539320 CLCF1Q9UBD9 225 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 CELSR1Q9NYQ6 3014 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 C2CD3Q4AC94 2353 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 NUDT17P0C025 328 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 SDC1P18827 310 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 CHMP24386 653 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 ANKRD26P1Q6NSI1 321 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 Q6ZSR9 355 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 ZNF551Q7Z340 670 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-206ENST00000539320 TRABD2AQ86V40 505 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 BANPQ8N9N5 519 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 FAM222BQ8WU58 562 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 UCN2Q96RP3 112 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 TM9SF2Q99805 663 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 GPATCH1Q9BRR8 931 aaKnown RBP20.13■□□□□ 0.81
SCARB1-206ENST00000539320 G6PC3Q9BUM1 346 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 SFXN3Q9BWM7 321 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 TUBB1Q9H4B7 451 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 FAM120CQ9NX05 1096 aaKnown RBP20.13■□□□□ 0.81
SCARB1-206ENST00000539320 FLRT3Q9NZU0 649 aa20.13■□□□□ 0.81
SCARB1-206ENST00000539320 MRTO4Q9UKD2 239 aaKnown RBP20.13■□□□□ 0.81
SCARB1-206ENST00000539320 RPH3AQ9Y2J0 694 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-206ENST00000539320 MED13LQ71F56 2210 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 MPDZO75970 2070 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 TTC36A6NLP5 189 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 FADS1O60427 444 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 IL33O95760 270 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 ZNF708P17019 499 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 RFX3P48380 749 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 PSMD4P55036 377 aaKnown RBP20.12■□□□□ 0.81
SCARB1-206ENST00000539320 DSCR4P56555 118 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-206ENST00000539320 CLDN18P56856 261 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 STX5Q13190 355 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 GAB1Q13480 694 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 ZNF385BQ569K4 471 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 SPNS3Q6ZMD2 512 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 KIF18BQ86Y91 864 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 OR2M3Q8NG83 312 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 ZFP28Q8NHY6 868 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 NRGNQ92686 78 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 WNT2BQ93097 391 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 CIDECQ96AQ7 238 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-206ENST00000539320 PPCDCQ96CD2 204 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 TSSK3Q96PN8 268 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 FAM111AQ96PZ2 611 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 POLDIP3Q9BY77 421 aaKnown RBP20.12■□□□□ 0.81
SCARB1-206ENST00000539320 ACBD3Q9H3P7 528 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 DSN1Q9H410 356 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 REEP4Q9H6H4 257 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 C3orf14Q9HBI5 128 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 EQTNQ9NQ60 294 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 JKAMPQ9P055 326 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 MED12LQ86YW9 2145 aa20.12■□□□□ 0.81
SCARB1-206ENST00000539320 AKAP10O43572 662 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 ZIC3O60481 467 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 NPHS1O60500 1241 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 TBX19O60806 448 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 CHRNGP07510 517 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 ALDH3A1P30838 453 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 DNAJA1P31689 397 aaKnown RBP20.11■□□□□ 0.81
SCARB1-206ENST00000539320 GPC1P35052 558 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 B3GALT5-AS1P59052 145 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 VSNL1P62760 191 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 SORDQ00796 357 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 FOXF2Q12947 444 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 GANABQ14697 944 aaKnown RBP20.11■□□□□ 0.81
SCARB1-206ENST00000539320 GRAMD2AQ8IUY3 354 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 HOMEZQ8IX15 550 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 CLHC1Q8NHS4 586 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 TWIST2Q8WVJ9 160 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 ZBED6CLQ96FA7 236 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-206ENST00000539320 CLEC4MQ9H2X3 399 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-206ENST00000539320 SDHAF3Q9NRP4 125 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 LGALS13Q9UHV8 139 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 TMED5Q9Y3A6 229 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 DNAJC15Q9Y5T4 150 aa20.11■□□□□ 0.81
SCARB1-206ENST00000539320 MTORP42345 2549 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 A6NNC1 897 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 TMEM233B4DJY2 109 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 LSM1O15116 133 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms