RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 GUSBP1Q15486 140 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 SGCBQ16585 318 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 RPS27LQ71UM5 84 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 FAM214BQ7L5A3 538 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 SLC44A2Q8IWA5 706 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 C1orf52Q8N6N3 182 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 FADS6Q8N9I5 356 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 OR4F6Q8NGB9 312 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 VSTM2LQ96N03 204 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 GPR78Q96P69 363 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 ZBTB26Q9HCK0 441 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 WHRNQ9P202 907 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 PCTPQ9UKL6 214 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 CLEC4AQ9UMR7 237 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 HMX2A2RU54 273 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 OR2M5A3KFT3 312 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 GMFGO60234 142 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 BCAS2O75934 225 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 SOX30O94993 753 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 PLGP00747 810 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 PDYNP01213 254 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 FCGR2AP12318 317 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 PAFAH1B1P43034 410 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 ZNF155Q12901 538 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 UAP1Q16222 522 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 SH2D4BQ5SQS7 431 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 METTL2BQ6P1Q9 378 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 MILR1Q7Z6M3 343 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 ZNF675Q8TD23 568 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 GFM2Q969S9 779 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 EXOSC8Q96B26 276 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 NTMT1Q9BV86 223 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 PRRG4Q9BZD6 226 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 STMN4Q9H169 189 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 VPS11Q9H270 941 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 FLRT3Q9NZU0 649 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 SENP1Q9P0U3 644 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 SAR1BQ9Y6B6 198 aa12.57□□□□□ -0.4
SMARCA4-206ENST00000538456 SHISA8B8ZZ34 492 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 IFNA2P01563 188 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 CTAGE8P0CG41 777 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 PPP3CBP16298 524 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 TSPAN8P19075 237 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 MAGEA4P43358 317 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 SLC6A8P48029 635 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 MRPS22P82650 360 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 NAB1Q13506 487 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 GANABQ14697 944 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 LGSNQ5TDP6 509 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 PODNL1Q6PEZ8 512 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 CTAGE4Q8IX94 777 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 PLD6Q8N2A8 252 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 SELENOMQ8WWX9 145 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 MTBPQ96DY7 904 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 REG4Q9BYZ8 158 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 ACTR6Q9GZN1 396 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
SMARCA4-206ENST00000538456 PPP6CO00743 305 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 EIF1AYO14602 144 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 TMCC2O75069 709 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 ALDOAP04075 364 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 IL3P08700 152 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 TYK2P29597 1187 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 CDKN1AP38936 164 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 EIF1AXP47813 144 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 SERPINB8P50452 374 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 PLTPP55058 493 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 CTBP2P56545 445 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 GNG11P61952 73 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 PSPHP78330 225 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 GGTA1PQ4G0N0 100 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 LETMD1Q6P1Q0 360 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 METTL25Q8N6Q8 603 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 OR7G2Q8NG99 324 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 OR6K3Q8NGY3 331 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 UHMK1Q8TAS1 419 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 ERP27Q96DN0 273 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 C1GALT1C1Q96EU7 318 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms