RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 OSBPL11Q9BXB4 747 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 ACTRT3Q9BYD9 372 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 GALNT9Q9HCQ5 603 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 NTMQ9P121 344 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 NBASA2RRP1 2371 aa12.09□□□□□ -0.47
COPS7A-207ENST00000538375 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 LRRTM2O43300 516 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SCO2O43819 266 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SLC19A2O60779 497 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SEMA7AO75326 666 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 NKX2-2O95096 273 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 IL33O95760 270 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 IL6P05231 212 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 GSNP06396 782 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 PGRP06401 933 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 KRT16P08779 473 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 CELA3AP09093 270 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 NCF2P19878 526 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 MATN1P21941 496 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 PTGS2P35354 604 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 CHI3L1P36222 383 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 CASP9P55211 416 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 POU6F2P78424 691 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SF3A3Q12874 501 aaKnown RBP eCLIP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 UBAP2LQ14157 1087 aaKnown RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 OR5M10Q6IEU7 315 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 CDC73Q6P1J9 531 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 ZNF621Q6ZSS3 439 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 FJX1Q86VR8 437 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 FAM26EQ8N5C1 309 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 GLB1L3Q8NCI6 653 aaPredicted RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 RFWD2Q8NHY2 731 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 PSMA8Q8TAA3 256 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SFXN5Q8TD22 340 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 CDS1Q92903 461 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 FAM120CQ9NX05 1096 aaKnown RBP12.08□□□□□ -0.48
COPS7A-207ENST00000538375 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SLC5A6Q9Y289 635 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 DOPEY2Q9Y3R5 2298 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
COPS7A-207ENST00000538375 USP9YO00507 2555 aaPredicted RBP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 A0A0G2JND7 137 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 A0A1B0GUH1 482 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 NPIPA2E9PIF3 369 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 NPIPA3F8WFD2 350 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 PRRG2O14669 202 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 SCN2BO60939 215 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 ANP32DO95626 131 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 TPOP07202 933 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 ESRRAP11474 423 aaPredicted RBP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 HPGDP15428 266 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 UQCRC2P22695 453 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 TRPC1P48995 793 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 MAN2A2P49641 1150 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 POLR2JP52435 117 aaKnown RBP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 RPS26P62854 115 aaKnown RBP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 STX5Q13190 355 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 SNTA1Q13424 505 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 HYAL4Q2M3T9 481 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 CCNJQ5T5M9 372 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 TIGD3Q6B0B8 471 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 OR9I1Q8NGQ6 314 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 SLC35G5Q96KT7 338 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 OR7D2Q96RA2 312 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 INPP5KQ9BT40 448 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 BTBD2Q9BX70 525 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 PIGUQ9H490 435 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 SDR39U1Q9NRG7 319 aaPredicted RBP12.07□□□□□ -0.48
COPS7A-207ENST00000538375 SDHAF3Q9NRP4 125 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 FLRT3Q9NZU0 649 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 PPP4R1LQ9P1A2 415 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 BTNL2Q9UIR0 455 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 PCDHGB3Q9Y5G1 929 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 EML6Q6ZMW3 1958 aa12.07□□□□□ -0.48
COPS7A-207ENST00000538375 LRRC3CA6NJW4 275 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 CCL21O00585 134 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 KCNK2O95069 426 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 UTS2O95399 124 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 STSP08842 583 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 TROVE2P10155 538 aaKnown RBP eCLIP12.06□□□□□ -0.48
COPS7A-207ENST00000538375 ATP6V1C1P21283 382 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 ELAVL4P26378 380 aaKnown RBP12.06□□□□□ -0.48
COPS7A-207ENST00000538375 EVI2BP34910 448 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
COPS7A-207ENST00000538375 PTGDSP41222 190 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 MAP3K8P41279 467 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 C3AR1Q16581 482 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 ARHGAP11AQ6P4F7 1023 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 TMEM81Q6P7N7 255 aa12.06□□□□□ -0.48
COPS7A-207ENST00000538375 MARCH3Q86UD3 253 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms