RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SMAD6O43541 496 aaKnown RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 HTR3BO95264 441 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 TUBG1P23258 451 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 CSNK2A1P68400 391 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 RBPJQ06330 500 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ARHGAP19Q14CB8 494 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 HSD11B1LQ7Z5J1 315 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PRR22Q8IZ63 422 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 MAL2Q969L2 176 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ISOC1Q96CN7 298 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 FAM118AQ9NWS6 357 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ACTL7AQ9Y615 435 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 NALCNQ8IZF0 1738 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 KIAA0513O60268 411 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 DDCP20711 480 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 CD38P28907 300 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PIGFQ07326 219 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 COL28A1Q2UY09 1125 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 GPR26Q8NDV2 337 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 OR52E1Q8NGJ3 308 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 OR6Q1Q8NGQ2 317 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 DMRT3Q9NQL9 472 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PRDM4Q9UKN5 801 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PCDHA9Q9Y5H5 950 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 H2AFB2P0C5Z0 115 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 TNFSF4P23510 183 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 SOX3P41225 446 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 CEACAM7Q14002 265 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PNCKQ6P2M8 343 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 PARS2Q7L3T8 475 aaKnown RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 OR5H2Q8NGV7 314 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ZNF160Q9HCG1 818 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 RAB3BP20337 219 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 CD68P34810 354 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ACTBP60709 375 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ACTG1P63261 375 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 HTRA3P83110 453 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 METTL2BQ6P1Q9 378 aaKnown RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 METTL2AQ96IZ6 378 aaKnown RBP15.9■□□□□ 0.14
SCARB1-205ENST00000538291 HDHD5Q9BXW7 423 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 ACOT13Q9NPJ3 140 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 TAS2R8Q9NYW2 309 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 OR6C2Q9NZP2 312 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 AP1M2Q9Y6Q5 423 aa15.9■□□□□ 0.14
SCARB1-205ENST00000538291 LPLP06858 475 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 OSMP13725 252 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 NADSYN1Q6IA69 706 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 LANCL3Q6ZV70 420 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SYNPOQ8N3V7 929 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 METTL25Q8N6Q8 603 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 RTP4Q96DX8 246 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SAMD8Q96LT4 415 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 CLSTN3Q9BQT9 956 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 IGSF5Q9NSI5 407 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 CLDN10P78369 228 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 IRF4Q15306 451 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 STK11Q15831 433 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 LIPIQ6XZB0 460 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 ZFP41Q8N8Y5 198 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SLC7A7Q9UM01 511 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 COL2A1P02458 1487 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 ZCWPW2A0A1B0GU75 182 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 LRRC37A3O60309 1634 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 POU3F2P20265 443 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 EIF2B1Q14232 305 aaKnown RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 ZNF704Q6ZNC4 412 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 MRPL41Q8IXM3 137 aaKnown RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 C22orf15Q8WYQ4 148 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SLC46A2Q9BY10 475 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SLC39A1Q9NY26 324 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 BTNL2Q9UIR0 455 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 RIMS3Q9UJD0 308 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 HEMK1Q9Y5R4 338 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 HSD17B1P14061 328 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 GDF1P27539 372 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SLC7A9P82251 487 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 FAM180BQ6P0A1 224 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 NAGSQ8N159 534 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 LSM14AQ8ND56 463 aaKnown RBP15.89■□□□□ 0.13
SCARB1-205ENST00000538291 HLA-CQ95604 372 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 ADAMTS5Q9UNA0 930 aa15.89■□□□□ 0.13
SCARB1-205ENST00000538291 CENPBD1B2RD01 187 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 PPP1R3BQ86XI6 285 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 ABCG5Q9H222 651 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 DNAJB11Q9UBS4 358 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 ERVK-19Q9WJR5 959 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 SLC35A3Q9Y2D2 325 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 DRGXA6NNA5 263 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 S100PP25815 95 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 LCN8Q6JVE9 175 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 TMEM184AQ6ZMB5 413 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 ACOT4Q8N9L9 421 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 ZBTB8BQ8NAP8 495 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-205ENST00000538291 LGALS12Q96DT0 336 aa15.88■□□□□ 0.13
SCARB1-205ENST00000538291 TOX2Q96NM4 488 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms