RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 NCKAP1Q9Y2A7 1128 aa8.65□□□□□ -1.02
DDB1-211ENST00000538280 KLHL20Q9Y2M5 609 aa8.65□□□□□ -1.02
DDB1-211ENST00000538280 ZNF780BQ9Y6R6 833 aa8.65□□□□□ -1.02
DDB1-211ENST00000538280 SNRNP200O75643 2136 aaKnown RBP8.65□□□□□ -1.03
DDB1-211ENST00000538280 ATG2BQ96BY7 2078 aa8.65□□□□□ -1.03
DDB1-211ENST00000538280 IRGMA1A4Y4 181 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 FAM221BA6H8Z2 402 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 DUXAA6NLW8 204 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 KDM4EB2RXH2 506 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 CHURC1-FNTBB4DL54 471 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 H3BN98 237 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SLC30A4O14863 429 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 P2RX6O15547 441 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 HRO43593 1189 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 KIAA0513O60268 411 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 GPX5O75715 221 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 UPK1BO75841 260 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 UBXN7O94888 489 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 OR5F1O95221 314 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
DDB1-211ENST00000538280 UGT2B7P16662 529 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 DRD1P21728 446 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 RPS4Y1P22090 263 aaKnown RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 CDH3P22223 829 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 IFNGR2P38484 337 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 BUD31P41223 144 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 OMPP47874 163 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 FNTBP49356 437 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 DGKEP52429 567 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SMSP52788 366 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 RUNX2Q13950 521 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 SPHARQ15513 63 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 MED22Q15528 200 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 LTB4RQ15722 352 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 DECR1Q16698 335 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ZNF181Q2M3W8 571 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ARHGAP11BQ3KRB8 267 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SOWAHCQ53LP3 525 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 SYT14P1Q58G82 188 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ZNF311Q5JNZ3 666 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 C3orf38Q5JPI3 329 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 FAM111BQ6SJ93 734 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ENPP7Q6UWV6 458 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 PLEKHG7Q6ZR37 379 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 PRR23CQ6ZRP0 262 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 RNF44Q7L0R7 432 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SZRD1Q7Z422 152 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 CCDC190Q86UF4 302 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 VRK2Q86Y07 508 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 LYSMD2Q8IV50 215 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 CYP4Z2PQ8N1L4 340 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 LRRC25Q8N386 305 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 POGLUT1Q8NBL1 392 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 TOR1AIP2Q8NFQ8 470 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 OR7G2Q8NG99 324 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 OR52I1Q8NGK6 324 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 OR8D4Q8NGM9 314 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 CCL4L1Q8NHW4 92 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 TMEM163Q8TC26 289 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 MRGPRX1Q96LB2 322 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ZNF582Q96NG8 517 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 MS4A4EQ96PG1 132 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 CHCHD6Q9BRQ6 235 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 MND1Q9BWT6 205 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 POLR2J2Q9GZM3 115 aaKnown RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 RNF167Q9H6Y7 350 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 TRIM45Q9H8W5 580 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 SP140LQ9H930 580 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 IL21RQ9HBE5 538 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 LYRM4Q9HD34 91 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SEMA4GQ9NTN9 838 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 NDUFB11Q9NX14 153 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 ACTR10Q9NZ32 417 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 PTGFRNQ9P2B2 879 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SEC14L4Q9UDX3 406 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 CFL2Q9Y281 166 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 GPR55Q9Y2T6 319 aaPredicted RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 PEX16Q9Y5Y5 336 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 SLC22A7Q9Y694 548 aa8.64□□□□□ -1.03
DDB1-211ENST00000538280 MDC1Q14676 2089 aaKnown RBP8.64□□□□□ -1.03
DDB1-211ENST00000538280 CCDC88CQ9P219 2028 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 MN1Q10571 1320 aaPredicted RBP8.63□□□□□ -1.03
DDB1-211ENST00000538280 ZZEF1O43149 2961 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 A0A087WV62 115 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 TMEM129A0AVI4 362 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 HYKKA2RU49 373 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 GSAPA4D1B5 854 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 K7ESF4 209 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 SCAMP1O15126 338 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 PRODHO43272 600 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 CTSVO60911 334 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 SNX4O95219 450 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 RAB36O95755 333 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 THY1P04216 161 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 THBS1P07996 1170 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 HBQ1P09105 142 aa8.63□□□□□ -1.03
DDB1-211ENST00000538280 SLC35G6P0C7Q6 338 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms