RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZNF576Q9H609 170 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 VRTNQ9H8Y1 702 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 PTTG2Q9NZH5 202 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 COPZ2Q9P299 210 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 LIPT1Q9Y234 373 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 MED16Q9Y2X0 877 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 LTBP4Q8N2S1 1624 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 BCAT2O15382 392 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 SORBS2O94875 1100 aaKnown RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 MSL3P1P0C860 447 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ETV5P41161 510 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 CDKN2CP42773 168 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 CRISP1P54107 249 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 MEDAGQ5VYS4 303 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 TREX2Q9BQ50 279 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 RDH14Q9HBH5 336 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 IL26Q9NPH9 171 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 CPNE7Q9UBL6 633 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 DNAJB11Q9UBS4 358 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 SCML1Q9UN30 329 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ABCG2Q9UNQ0 655 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 SULT2B1O00204 365 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 FMO6PO60774 539 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 UBL4AP11441 157 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 HMGCLP35914 325 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF829Q3KNS6 432 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 RUNDC3AQ59EK9 446 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 MRPL43Q8N983 215 aaKnown RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 GCDHQ92947 438 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 FAM46BQ96A09 425 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ZMYND19Q96E35 227 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 TOXO94900 526 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ADAP00813 363 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 KCNAB2Q13303 367 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ZNF773Q6PK81 442 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 DPPA4Q7L190 304 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 TMEM173Q86WV6 379 aaPredicted RBP10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ADAMTS18Q8TE60 1221 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 ANKRD10Q9NXR5 420 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
LINC00346-201ENST00000538077 A0A1W2PPW3 197 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CCRL2O00421 344 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 DOK2O60496 412 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 FOXD2O60548 495 aaPredicted RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CD38P28907 300 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF252P-AS1Q0IIN9 211 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 TCEAL8Q8IYN2 117 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 FTMTQ8N4E7 242 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 MS4A4EQ96PG1 132 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CLSTN3Q9BQT9 956 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 MTMR10Q9NXD2 777 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 MYH3P11055 1940 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 KLF11O14901 512 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 RBBP9O75884 186 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 RASAL1O95294 804 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 HOXD8P13378 290 aaPredicted RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CTHP32929 405 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 MOGSQ13724 837 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 DCST2Q5T1A1 773 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 RPL13AP3Q6NVV1 102 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF440Q8IYI8 595 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 OR6C4Q8NGE1 309 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 OR9A4Q8NGU2 314 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 C15orf40Q8WUR7 153 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 SLC45A3Q96JT2 553 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 URM1Q9BTM9 101 aaKnown RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 KCNIP3Q9Y2W7 256 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 A0A0G2JPF8 293 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 KRBA1A5PL33 1030 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 HNRNPCL3B7ZW38 293 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 TPPPO94811 219 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 TFPTP0C1Z6 253 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 HNRNPCL4P0DMR1 293 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 PSMB10P40306 273 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ACTA2P62736 377 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ACTG2P63267 376 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 FADDQ13158 208 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 EIF5A2Q9GZV4 153 aaKnown RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 BTAF1O14981 1849 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 TRAV27A0A087WT01 109 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 PROZP22891 400 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CTSCP53634 463 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 CTBSQ01459 385 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 NKPD1Q17RQ9 610 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF404Q494X3 552 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 SFRP4Q6FHJ7 346 aaPredicted RBP10.58□□□□□ -0.72
LINC00346-201ENST00000538077 UNQ6126/PRO20091Q6UXV3 157 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 LINC00696Q6ZRV3 163 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 S100PBPQ96BU1 408 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF649Q9BS31 505 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 SLC25A18Q9H1K4 315 aa10.58□□□□□ -0.72
LINC00346-201ENST00000538077 MTHFD2LQ9H903 347 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms