RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PLTPP55058 493 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 F2RL1P55085 397 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NME5P56597 212 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM3BP58499 235 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NANOS3P60323 173 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SIRPAP78324 504 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CYP4F2P78329 520 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CDK16Q00536 496 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DR1Q01658 176 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ILF3Q12906 894 aaKnown RBP eCLIP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DLG1Q12959 904 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ABRQ12979 859 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DNASE1L3Q13609 305 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CUL1Q13616 776 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LAMB3Q13751 1172 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DHX34Q14147 1143 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IL11RAQ14626 422 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 EFTUD2Q15029 972 aaKnown RBP eCLIP2.4□□□□□ -2.035e-7■■■■■ 63.3
TNFRSF1A-210ENST00000537842 PPP1R7Q15435 360 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SMN1Q16637 294 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 AP5B1Q2VPB7 878 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C18orf21Q32NC0 220 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KRTAP15-1Q3LI76 137 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GPR33Q49SQ1 333 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IFI44LQ53G44 452 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FASTKD1Q53R41 847 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SGO1Q5FBB7 561 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CFAP157Q5JU67 520 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SH2D4BQ5SQS7 431 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LDLRAP1Q5SW96 308 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C6orf141Q5SZD1 244 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RIPPLY2Q5TAB7 128 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZDHHC20Q5W0Z9 365 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF470Q6ECI4 717 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TMEM71Q6P5X7 295 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WDR74Q6RFH5 385 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PACS1Q6VY07 963 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MBOAT1Q6ZNC8 495 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RBM44Q6ZP01 1051 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM92BQ6ZTR7 304 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRILQ7L0X0 811 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TAOK1Q7L7X3 1001 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LINC00523Q86TU6 105 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRIM73Q86UV7 250 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DTX2Q86UW9 622 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZFAND4Q86XD8 727 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ADGRG3Q86Y34 549 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CNTN4Q8IWV2 1026 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CTAGE4Q8IX94 777 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC22A15Q8IZD6 547 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SPATA6LQ8N4H0 392 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SIDT2Q8NBJ9 832 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RBM15BQ8NDT2 890 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR4E2Q8NGC2 313 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR4D9Q8NGE8 314 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FBXO25Q8TCJ0 367 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PTPMT1Q8WUK0 201 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ANKRD49Q8WVL7 239 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DDB2Q92466 427 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC9A6Q92581 669 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NPIPB3Q92617 1050 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TFGQ92734 400 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CORO2AQ92828 525 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ART4Q93070 314 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RFKQ969G6 155 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MSI2Q96DH6 328 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SPACA9Q96E40 222 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C14orf79Q96F83 325 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PERPQ96FX8 193 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TPD52L3Q96J77 140 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC41A2Q96JW4 573 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C9orf72Q96LT7 481 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C12orf66Q96MD2 445 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WDFY2Q96P53 400 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TGM7Q96PF1 710 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FCRL4Q96PJ5 515 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TEFMQ96QE5 360 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR2A14Q96R47 310 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRR25Q96S07 402 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CDRT15Q96T59 188 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NDNQ99608 321 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 COPS8Q99627 209 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAP3K3Q99759 626 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CTRCQ99895 268 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GSDMCQ9BYG8 508 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SEMA4CQ9C0C4 833 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF350Q9GZX5 532 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IL22Q9GZX6 179 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAB17Q9H0T7 212 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KIR3DX1Q9H7L2 352 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 UCK1Q9HA47 277 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MRM3Q9HC36 420 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SYTL2Q9HCH5 934 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GPN1Q9HCN4 374 aaPredicted RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC22A11Q9NSA0 550 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HOMER3Q9NSC5 361 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC6A13Q9NSD5 602 aa2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IARS2Q9NSE4 1012 aaKnown RBP2.4□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NMRK1Q9NWW6 199 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms