RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
USP28-204ENST00000537642 DECR1Q16698 335 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 NHSL2Q5HYW2 709 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 BEND6Q5SZJ8 279 aaPredicted RBP13.47□□□□□ -0.25
USP28-204ENST00000537642 DCST1Q5T197 706 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 PLCZ1Q86YW0 608 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 KRTCAP2Q8N6L1 136 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 OR10Q1Q8NGQ4 319 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 GIMAP5Q96F15 307 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 UGT2B28Q9BY64 529 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 UCK2Q9BZX2 261 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 OR2B2Q9GZK3 357 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 Q9N2J8 555 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
USP28-204ENST00000537642 Q9UFV3 132 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 FBXL2Q9UKC9 423 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
USP28-204ENST00000537642 TEX15Q9BXT5 2789 aa13.47□□□□□ -0.25
USP28-204ENST00000537642 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 TTC36A6NLP5 189 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 FAM90A27PA6NNH2 459 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 KDM4EB2RXH2 506 aaPredicted RBP13.46□□□□□ -0.25
USP28-204ENST00000537642 FADS1O60427 444 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 ERLIN1O75477 346 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 IL33O95760 270 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 G6PDP11413 515 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 COX6B1P14854 86 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 DDX5P17844 614 aaKnown RBP13.46□□□□□ -0.25
USP28-204ENST00000537642 GRK2P25098 689 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 PTGER4P35408 488 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 RPL3P39023 403 aaKnown RBP13.46□□□□□ -0.25
USP28-204ENST00000537642 PRKAG1P54619 331 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 WDR4P57081 412 aaKnown RBP13.46□□□□□ -0.25
USP28-204ENST00000537642 EMX2Q04743 252 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 TFF3Q07654 80 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 STX3Q13277 289 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 MLC1Q15049 377 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 MCEMP1Q8IX19 187 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 RIMKLAQ8IXN7 391 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 ANKRD42Q8N9B4 389 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 ACBD4Q8NC06 268 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 CEP70Q8NHQ1 597 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 PIK3R3Q92569 461 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 ABTB1Q969K4 478 aaPredicted RBP13.46□□□□□ -0.25
USP28-204ENST00000537642 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 C3orf14Q9HBI5 128 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 HAO1Q9UJM8 370 aa13.46□□□□□ -0.25
USP28-204ENST00000537642 A0A1W2PRB8 838 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 TMEM120BA0PK00 339 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 EMC8O43402 210 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 SCO2O43819 266 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 TOXO94900 526 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 NKX2-2O95096 273 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 SNUPNO95149 360 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 IGKV1D-16P01601 117 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 ACP2P11117 423 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 SRD5A2P31213 254 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 RFX3P48380 749 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 ACSF3Q4G176 576 aaPredicted RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 CPTPQ5TA50 214 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 HHATQ5VTY9 493 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 MFSD12Q6NUT3 480 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 SZRD1Q7Z422 152 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 LIX1LQ8IVB5 337 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 PM20D2Q8IYS1 436 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 CDRT4Q8N9R6 151 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 OR14L1PQ8NHC6 308 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 FBXO30Q8TB52 745 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 COQ8BQ96D53 544 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 FAM120BQ96EK7 910 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 RMND5BQ96G75 393 aaPredicted RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 C16orf58Q96GQ5 468 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 RTN4RQ9BZR6 473 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 ENKD1Q9H0I2 346 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 AKTIPQ9H8T0 292 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 ASIC5Q9NY37 505 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 MRTO4Q9UKD2 239 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 ABCG2Q9UNQ0 655 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 CAMK2AQ9UQM7 478 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 EIF3LQ9Y262 564 aaKnown RBP13.45□□□□□ -0.26
USP28-204ENST00000537642 DOCK7Q96N67 2140 aa13.45□□□□□ -0.26
USP28-204ENST00000537642 ABCA12Q86UK0 2595 aa13.44□□□□□ -0.26
USP28-204ENST00000537642 KCNH1O95259 989 aa13.44□□□□□ -0.26
USP28-204ENST00000537642 EPPINO95925 133 aa13.44□□□□□ -0.26
USP28-204ENST00000537642 ACTL6AO96019 429 aa13.44□□□□□ -0.26
USP28-204ENST00000537642 PRPS1L1P21108 318 aa13.44□□□□□ -0.26
USP28-204ENST00000537642 ZFP36L2P47974 494 aaKnown RBP13.44□□□□□ -0.26
USP28-204ENST00000537642 PSMD4P55036 377 aaKnown RBP13.44□□□□□ -0.26
USP28-204ENST00000537642 WNT3P56703 355 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms