RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MPZL3Q6UWV2 235 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PTOV1Q86YD1 416 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GPSM1Q86YR5 675 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 GPR150Q8NGU9 434 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 OR4Q3Q8NH05 313 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 RGMAQ96B86 450 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 AARSD1Q9BTE6 412 aaKnown RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 AP5M1Q9H0R1 490 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 TSPAN10Q9H1Z9 355 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 LRRN3Q9H3W5 708 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 LRTM1Q9HBL6 345 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 CRTAC1Q9NQ79 661 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 NDOR1Q9UHB4 597 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 OPN4Q9UHM6 478 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PCDHGC4Q9Y5F7 938 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PCDHGA5Q9Y5G8 931 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
SRGAP1-202ENST00000537556 BPTFQ12830 3046 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 A0A0D9SG52 128 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM72A0PK05 275 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 UBE2QL1A1L167 161 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM72CH0Y354 149 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 GABRPO00591 440 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC2A1P11166 492 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 HIST1H1BP16401 226 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 GALP22466 123 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 CRATP43155 626 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC14A1Q13336 389 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 CAPSQ13938 189 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SF1Q15637 639 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 DNLZQ5SXM8 178 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 LDLRAD1Q5T700 205 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM72AQ5TYM5 149 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM72DQ6L9T8 149 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 PAQR3Q6TCH7 311 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ETV3LQ6ZN32 361 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ACOT1Q86TX2 421 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM72BQ86X60 149 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 PNPLA1Q8N8W4 532 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 OR2L5Q8NG80 312 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ASB13Q8WXK3 278 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 WNT8BQ93098 351 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ESAMQ96AP7 390 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 C3orf49Q96BT1 292 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 MISP3Q96FF7 219 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ASB16Q96NS5 453 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TGIF2Q9GZN2 237 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM138Q9NPI0 162 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 WASF3Q9UPY6 502 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 CCL27Q9Y4X3 112 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 CHST10O43529 356 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 MED6O75586 246 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 OSMP13725 252 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ADRB3P13945 408 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 NOS3P29474 1203 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TM4SF1P30408 202 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 GKP32189 559 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 MTNR1BP49286 362 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 HMGA2P52926 109 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 RPP30P78346 268 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TIAL1Q01085 375 aaKnown RBP eCLIP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TLE2Q04725 743 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SKP2Q13309 424 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SUPT20HL1Q3ZLR7 823 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 POMZP3Q6PJE2 187 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF852Q6ZMS4 543 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM200AQ86VY9 491 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ZBTB8OSQ8IWT0 167 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM98AQ8NCA5 519 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 OR11G2Q8NGC1 345 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM151AQ8WW52 585 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 FBXO17Q96EF6 278 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 PANX1Q96RD7 426 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 NPY6RQ99463 290 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TMED9Q9BVK6 235 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 COLEC11Q9BWP8 271 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 OR10A4Q9H209 315 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 UNKLQ9H9P5 680 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TBC1D17Q9HA65 648 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ACSS1Q9NUB1 689 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 ASB6Q9NWX5 421 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 TAS2R5Q9NYW4 299 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 MARCH4Q9P2E8 410 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 EXOSC1Q9Y3B2 195 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 EP400Q96L91 3159 aa8.03□□□□□ -1.12
SRGAP1-202ENST00000537556 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PPIHO43447 177 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 EFCAB14O75071 495 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NFATC1O95644 943 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 CRYABP02511 175 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms