RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 BGNP21810 368 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 GPC1P35052 558 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 RPL14P50914 215 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 DECR1Q16698 335 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 C1orf185Q5T7R7 199 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 ZCCHC12Q6PEW1 402 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 CAMKMTQ7Z624 323 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 PLCZ1Q86YW0 608 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 ULK2Q8IYT8 1036 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 CDRT4Q8N9R6 151 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 FAM83FQ8NEG4 500 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 OR7A2PQ8NGA2 310 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 EFHD2Q96C19 240 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 TLCD1Q96CP7 247 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 C1orf50Q9BV19 199 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 OR2B2Q9GZK3 357 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 C3orf14Q9HBI5 128 aa15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 SIRT3Q9NTG7 399 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 MRTO4Q9UKD2 239 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-205ENST00000537164 C2orf72A6NCS6 295 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 EMC8O43402 210 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 ACTL6AO96019 429 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 LAMP1P11279 417 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 EVI2BP34910 448 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 PSMD4P55036 377 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 WDR4P57081 412 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 STX3Q13277 289 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 VPS26BQ4G0F5 336 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 EIPR1Q53HC9 387 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 PM20D2Q8IYS1 436 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 NUP43Q8NFH3 380 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 MARVELD3Q96A59 401 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 DTNBP1Q96EV8 351 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 MS4A4EQ96PG1 132 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 TREX2Q9BQ50 279 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 UGT2B28Q9BY64 529 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 ENKD1Q9H0I2 346 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 SERHLQ9NQF3 203 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 ATAD3AQ9NVI7 634 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 NOP53Q9NZM5 478 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 MAPRE3Q9UPY8 281 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 EIF3LQ9Y262 564 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 MED12Q93074 2177 aa15.66■□□□□ 0.1
SFSWAP-205ENST00000537164 PCNX3Q9H6A9 2034 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 PDZD2O15018 2839 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 C15orf38-AP3S2A0A0A6YYH1 394 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 A0A1W2PRB8 838 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 TMEM120BA0PK00 339 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 B4DXG7 233 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 FAM47E-STBD1D6RA91 191 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 C19orf84I3L1E1 186 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 G6PDP11413 515 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 BMP7P18075 431 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 SRD5A2P31213 254 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 GFRA1P56159 465 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 CLDN8P56748 225 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 TFF3Q07654 80 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 BST1Q10588 318 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 WIPI1Q5MNZ9 446 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 CPTPQ5TA50 214 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 RIPPLY2Q5TAB7 128 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 MFSD12Q6NUT3 480 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 WDR53Q7Z5U6 358 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 FAM110BQ8TC76 370 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 OR5P2Q8WZ92 322 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 FAM120BQ96EK7 910 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 PRPF18Q99633 342 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 BHLHE41Q9C0J9 482 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 RUBCNLQ9H714 662 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 AKTIPQ9H8T0 292 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 TMBIM4Q9HC24 238 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 FAM120CQ9NX05 1096 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 SLC6A5Q9Y345 797 aa15.65■□□□□ 0.1
SFSWAP-205ENST00000537164 SNNO75324 88 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 KCNH1O95259 989 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 EPPINO95925 133 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 CPN1P15169 458 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 IGFBP2P18065 325 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 GABRA3P34903 492 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 ADH7P40394 386 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 KIR3DL1P43629 444 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 DIO3P55073 304 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 PRR5P85299 388 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 SF3B4Q15427 424 aaKnown RBP eCLIP15.64■□□□□ 0.093e-21■■■■■ 58.8
SFSWAP-205ENST00000537164 PDCD2Q16342 344 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 HHATQ5VTY9 493 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 SEM1Q6ZVN7 128 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 YRDCQ86U90 279 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 CCDC71Q8IV32 467 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 KRTCAP2Q8N6L1 136 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 FADS6Q8N9I5 356 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 SLC16A11Q8NCK7 471 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 RAB3IL1Q8TBN0 382 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 ABTB1Q969K4 478 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 ZBTB9Q96C00 473 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 WDYHV1Q96HA8 205 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 SPOCK3Q9BQ16 436 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 MEAF6Q9HAF1 191 aa15.64■□□□□ 0.09
SFSWAP-205ENST00000537164 EQTNQ9NQ60 294 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms