RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C2orf80Q0P641 193 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SPDYAQ5MJ70 313 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SH2D4BQ5SQS7 431 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR2A2Q6IF42 318 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TRMT10CQ7L0Y3 403 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CDC26Q8NHZ8 85 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DSN1Q9H410 356 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GSX1Q9H4S2 264 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 NEUROD4Q9HD90 331 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SDHAF3Q9NRP4 125 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DNHD1Q96M86 4753 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 A0A087WV62 115 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SLC22A20A6NK97 555 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 B4DXG7 233 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GOLGA8RI6L899 631 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MSTNO14793 375 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SLITRK5O94991 958 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 JUNP05412 331 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GSTA1P08263 222 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 NCBP2P52298 156 aaKnown RBP eCLIP17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 B3GALT5-AS1P59052 145 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CYP27C1Q4G0S4 372 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 UBQLNLQ8IYU4 475 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MEIOBQ8N635 442 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FADS6Q8N9I5 356 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 WFDC11Q8NEX6 87 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ACMSDQ8TDX5 336 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GSTO2Q9H4Y5 243 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MID1IP1Q9NPA3 183 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MIEF1Q9NQG6 463 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GRID1Q9ULK0 1009 aa17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 EIF3LQ9Y262 564 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PCNX3Q9H6A9 2034 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 C17orf51A8MQB3 221 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 RIPK2O43353 540 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SMNDC1O75940 238 aaKnown RBP eCLIP17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 HK1P19367 917 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CD53P19397 219 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MC3RP41968 323 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 EEFSECP57772 596 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DECR1Q16698 335 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 IMPG1Q17R60 797 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 RAET1LQ5VY80 246 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CCNYL1Q8N7R7 359 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR2M3Q8NG83 312 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 BEX4Q9NWD9 120 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TAS2R7Q9NYW3 318 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ABCG2Q9UNQ0 655 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 C19orf53Q9UNZ5 99 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TESMINQ9Y4I5 508 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TLN2Q9Y4G6 2542 aa17.78■□□□□ 0.44
TNFRSF1B-204ENST00000536782 A0A1W2PPR1 153 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FADS1O60427 444 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PYGBP11216 843 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 NTSP30990 170 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 HOXC12P31275 282 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CLK3P49761 638 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FOXA1P55317 472 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GANABQ14697 944 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PRSS53Q2L4Q9 553 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TMEM107Q6UX40 140 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CNPY4Q8N129 248 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CNEP1R1Q8N9A8 125 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 STARD4Q96DR4 205 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CCDC126Q96EE4 140 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PTGES2Q9H7Z7 377 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 Q9N2J8 555 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DDX18Q9NVP1 670 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MED11Q9P086 117 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PSMC3IPQ9P2W1 217 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DCDC2Q9UHG0 476 aa17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MRTO4Q9UKD2 239 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 WBP11Q9Y2W2 641 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FN1P02751 2386 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 LINC01387J3KSC0 135 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 UPK1AO00322 258 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 UBFD1O14562 309 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PCYT1AP49585 367 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 NAA20P61599 178 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM27E3Q08E93 113 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 STX5Q13190 355 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNHIT3Q15649 155 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 VWA1Q6PCB0 445 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 OR2L13Q8N349 312 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM76AQ8TAV0 307 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PGM2Q96G03 612 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM111AQ96PZ2 611 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 GLIPR2Q9H4G4 154 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 MYNNQ9NPC7 610 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 FAM120CQ9NX05 1096 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZNF337Q9Y3M9 751 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 POLR3HQ9Y535 204 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 ZANQ9Y493 2812 aa17.76■□□□□ 0.43
TNFRSF1B-204ENST00000536782 H3BQF6 201 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 TNFRSF21O75509 655 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 CRCPO75575 148 aa17.75■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PSMG1O95456 288 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms