RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 RASSF6Q6ZTQ3 369 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 PAQR7Q86WK9 346 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 NKAIN4Q8IVV8 208 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 SLC16A11Q8NCK7 471 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 GAL3ST3Q96A11 431 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 SLC25A46Q96AG3 418 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 C1GALT1C1Q96EU7 318 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 YARS2Q9Y2Z4 477 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 TRBV23OR9-2A0A075B6M9 112 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 POM121BA6NF01 834 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 ZIC2O95409 532 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 GNSP15586 552 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 AZGP1P25311 298 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 PRKAR1BP31321 381 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 OMPP47874 163 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 CLDN2P57739 230 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 ERVK-21P61565 698 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 RPS15AP62244 130 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 HNRNPA0Q13151 305 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 SLC30A6Q6NXT4 461 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 PARM1Q6UWI2 310 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 ASPGQ86U10 573 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 OR7G2Q8NG99 324 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 CDS1Q92903 461 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 MYADMQ96S97 322 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 MRPS18AQ9NVS2 196 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 MUTYHQ9UIF7 546 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 F5P12259 2224 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 IQCMA0A1B0GVH7 501 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 A6NL46 340 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 DUXAA6NLW8 204 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 H3BQ06 376 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 IL1AP01583 271 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CLEC2LP0C7M8 214 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SLC35G6P0C7Q6 338 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CPN2P22792 545 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 GPR4P46093 362 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 PPP2CBP62714 309 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 PPP2CAP67775 309 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 FAM214AQ32MH5 1076 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TYW3Q6IPR3 259 aaKnown RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ZCCHC10Q8TBK6 192 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ACOT11Q8WXI4 607 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 KCTD7Q96MP8 289 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 OR2A14Q96R47 310 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 MCHR1Q99705 422 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SRMSQ9H3Y6 488 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 LRRTM2O43300 516 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CDH11P55287 796 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SNRPNP63162 240 aaKnown RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 PLK5Q496M5 336 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 OR4N5Q8IXE1 308 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 Q8N9G6 341 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 PSD4Q8NDX1 1056 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 UFD1Q92890 307 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SCARF2Q96GP6 870 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 C10orf90Q96M02 699 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 MS4A4EQ96PG1 132 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CACYBPQ9HB71 228 aaKnown RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 EXOSC1Q9Y3B2 195 aaKnown RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 GSAPA4D1B5 854 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 KDM4EB2RXH2 506 aaPredicted RBP12.3□□□□□ -0.44
LDLR-203ENST00000535915 STK25O00506 426 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SLC30A4O14863 429 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 PTNP21246 168 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 NTSR1P30989 418 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 CASP3P42574 277 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 TNFRSF17Q02223 184 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ZNF79Q15937 498 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 DECR1Q16698 335 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 ARMC4Q5T2S8 1044 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 MFSD12Q6NUT3 480 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 FRRS1Q6ZNA5 592 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 SIMC1Q8NDZ2 872 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 IL17RDQ8NFM7 739 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 OR1E3Q8WZA6 343 aa12.3□□□□□ -0.44
LDLR-203ENST00000535915 OSTF1Q92882 214 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms