RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ABCA12Q86UK0 2595 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 TOXO94900 526 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 MYZAPP0CAP1 466 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 GABRA3P34903 492 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 EVI2BP34910 448 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 IL23RQ5VWK5 629 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 ACBD4Q8NC06 268 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 NUP43Q8NFH3 380 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 OR14L1PQ8NHC6 308 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 CEP70Q8NHQ1 597 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 C3orf14Q9HBI5 128 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 FBXL2Q9UKC9 423 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 CAMK2AQ9UQM7 478 aa27.57■■■□□ 2
SSSCA1-207ENST00000533115 IL33O95760 270 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 ACTL6AO96019 429 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 GRK2P25098 689 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 GCKP35557 465 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 PRKAG1P54619 331 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 PSMD4P55036 377 aaKnown RBP27.56■■■□□ 2
SSSCA1-207ENST00000533115 TFF3Q07654 80 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 PTGR1Q14914 329 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 ACSF3Q4G176 576 aaPredicted RBP27.56■■■□□ 2
SSSCA1-207ENST00000533115 DCST1Q5T197 706 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 OR5M10Q6IEU7 315 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 SEM1Q6ZVN7 128 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 ZNF781Q8N8C0 355 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 OR7A2PQ8NGA2 310 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 HOXB13Q92826 284 aaPredicted RBP27.56■■■□□ 2
SSSCA1-207ENST00000533115 DTNBP1Q96EV8 351 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 WDYHV1Q96HA8 205 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 APCP25054 2843 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 LRBAP50851 2863 aa27.56■■■□□ 2
SSSCA1-207ENST00000533115 ARHGAP21Q5T5U3 1957 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 FADS1O60427 444 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 EPPINO95925 133 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 EFNA1P20827 205 aaPredicted RBP27.55■■■□□ 2
SSSCA1-207ENST00000533115 SRD5A2P31213 254 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 MAP3K8P41279 467 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 MLC1Q15049 377 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 SF3B4Q15427 424 aaKnown RBP eCLIP27.55■■■□□ 2
SSSCA1-207ENST00000533115 VPS26BQ4G0F5 336 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 GDF7Q7Z4P5 450 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 TRIM8Q9BZR9 551 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 C20orf27Q9GZN8 174 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 TAS2R10Q9NYW0 307 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 ABCG2Q9UNQ0 655 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.55■■■□□ 2
SSSCA1-207ENST00000533115 RAP2CQ9Y3L5 183 aa27.55■■■□□ 2
SSSCA1-207ENST00000533115 GIMAP1-GIMAP5A0A087WTJ2 511 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 GXYLT2A0PJZ3 443 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 EMC8O43402 210 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 SCO2O43819 266 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 SNUPNO95149 360 aaKnown RBP27.54■■■□□ 2
SSSCA1-207ENST00000533115 KCNH1O95259 989 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 RFX3P48380 749 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 SLC1A6P48664 564 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 MEX3BQ6ZN04 569 aaKnown RBP27.54■■■□□ 2
SSSCA1-207ENST00000533115 SZRD1Q7Z422 152 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 CDRT4Q8N9R6 151 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 GPR151Q8TDV0 419 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 PIK3R3Q92569 461 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 GIMAP5Q96F15 307 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 MS4A4EQ96PG1 132 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 TREX2Q9BQ50 279 aaPredicted RBP27.54■■■□□ 2
SSSCA1-207ENST00000533115 FLRT3Q9NZU0 649 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 PPP4R1LQ9P1A2 415 aa27.54■■■□□ 2
SSSCA1-207ENST00000533115 EIF3LQ9Y262 564 aaKnown RBP27.54■■■□□ 2
SSSCA1-207ENST00000533115 MRPS18CQ9Y3D5 142 aaKnown RBP27.54■■■□□ 2
SSSCA1-207ENST00000533115 NKX2-2O95096 273 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 LAMP1P11279 417 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 BGNP21810 368 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 MSX1P28360 303 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 MAD2L1Q13257 205 aaPredicted RBP27.53■■■□□ 2
SSSCA1-207ENST00000533115 PDCD2Q16342 344 aaPredicted RBP27.53■■■□□ 2
SSSCA1-207ENST00000533115 CPTPQ5TA50 214 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 IFNEQ86WN2 208 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 LACC1Q8IV20 430 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 LIX1LQ8IVB5 337 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 NPDC1Q9NQX5 325 aaPredicted RBP27.53■■■□□ 2
SSSCA1-207ENST00000533115 ATAD3AQ9NVI7 634 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 FAM120CQ9NX05 1096 aaKnown RBP27.53■■■□□ 2
SSSCA1-207ENST00000533115 HCFC1P51610 2035 aa27.53■■■□□ 2
SSSCA1-207ENST00000533115 A0A1W2PRB8 838 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 HSPB2A8KAH6 182 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 C17orf51A8MQB3 221 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 KDM4EB2RXH2 506 aaPredicted RBP27.52■■■□□ 2
SSSCA1-207ENST00000533115 B4DXG7 233 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 ERLIN1O75477 346 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 EMX2Q04743 252 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 HSPB2Q16082 182 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 ZNF295-AS1Q8N0V1 137 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 KRTCAP2Q8N6L1 136 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 OR4K17Q8NGC6 315 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 SLC9A6Q92581 669 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 RMND5BQ96G75 393 aaPredicted RBP27.52■■■□□ 2
SSSCA1-207ENST00000533115 SORT1Q99523 831 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 PRPF18Q99633 342 aaKnown RBP27.52■■■□□ 2
SSSCA1-207ENST00000533115 SDHAF3Q9NRP4 125 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 SIRT3Q9NTG7 399 aaPredicted RBP27.52■■■□□ 2
SSSCA1-207ENST00000533115 DKKL1Q9UK85 242 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms