RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 PSMD4P55036 377 aaKnown RBP13.76□□□□□ -0.21
CPSF1-208ENST00000532560 CASP6P55212 293 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 HBA1P69905 142 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 MOAP1Q96BY2 351 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 TEX37Q96LM6 180 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 JSRP1Q96MG2 331 aaPredicted RBP13.76□□□□□ -0.21
CPSF1-208ENST00000532560 DEFB127Q9H1M4 99 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 UBQLN3Q9H347 655 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 GALNT9Q9HCQ5 603 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 FAM120CQ9NX05 1096 aaKnown RBP13.76□□□□□ -0.21
CPSF1-208ENST00000532560 ABCG2Q9UNQ0 655 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 C15orf41Q9Y2V0 281 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 LIPGQ9Y5X9 500 aa13.76□□□□□ -0.21
CPSF1-208ENST00000532560 NINQ8N4C6 2090 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 TRGV8A0A0C4DH27 118 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 A0A1B0GTH9 108 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 A0A1B0GVC2 190 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 CFAP73A6NFT4 308 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 WIPF3A6NGB9 483 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SNPHO15079 494 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 CFLARO15519 480 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 LRRTM2O43300 516 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SUSD5O60279 629 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SNX3O60493 162 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 HCN1O60741 890 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SCN2BO60939 215 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 ICOSLGO75144 302 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 KCNH1O95259 989 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 HMGN2P05204 90 aaKnown RBP13.75□□□□□ -0.21
CPSF1-208ENST00000532560 CELA3AP09093 270 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 ACP2P11117 423 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 CYP4B1P13584 511 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 PTGS2P35354 604 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 PER3P56645 1201 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 UFM1P61960 85 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SLC10A1Q14973 349 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 C3AR1Q16581 482 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 GSTA3Q16772 222 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 FAM174BQ3ZCQ3 159 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 PDCD4Q53EL6 469 aaKnown RBP13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SPANXN4Q5MJ08 99 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 ANXA8L1Q5VT79 327 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 BHLHB9Q6PI77 547 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 ACAD11Q709F0 780 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 TRILQ7L0X0 811 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 CLECL1Q8IZS7 167 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SLC16A11Q8NCK7 471 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 VPS37AQ8NEZ2 397 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 FAM57AQ8TBR7 257 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 GPR151Q8TDV0 419 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 SLC9A6Q92581 669 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 RMND5BQ96G75 393 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-208ENST00000532560 OR52B2Q96RD2 323 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 STACQ99469 402 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 ACKR4Q9NPB9 350 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 DUSP22Q9NRW4 184 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 GIN1Q9NXP7 522 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 WIF1Q9Y5W5 379 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 LRRK2Q5S007 2527 aa13.75□□□□□ -0.21
CPSF1-208ENST00000532560 PRSS51A0A1B0GVH4 220 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 GXYLT2A0PJZ3 443 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 AQP7O14520 342 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 PDE9AO76083 593 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 KRT16P08779 473 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 ALOX5P09917 674 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 RNF224P0DH78 156 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 GDF1P27539 372 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 PTPN6P29350 595 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 IL12AP29459 219 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 S100A3P33764 101 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 EVI2BP34910 448 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 SOAT1P35610 550 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 NME5P56597 212 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 PHC1P78364 1004 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 TP53BP2Q13625 1128 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 LASP1Q14847 261 aaKnown RBP13.74□□□□□ -0.21
CPSF1-208ENST00000532560 DUSP5Q16690 384 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF1-208ENST00000532560 TIGD3Q6B0B8 471 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 ANGPTL8Q6UXH0 198 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 FJX1Q86VR8 437 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 GLB1L3Q8NCI6 653 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-208ENST00000532560 OR4A15Q8NGL6 344 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 OR1J4Q8NGS1 313 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 FBXO30Q8TB52 745 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 JADE3Q92613 823 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 C16orf58Q96GQ5 468 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 ZBTB18Q99592 522 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 ACTRT3Q9BYD9 372 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 TCF7L2Q9NQB0 619 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 SDR39U1Q9NRG7 319 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-208ENST00000532560 GPATCH2Q9NW75 528 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 ZIM2Q9NZV7 527 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 TINAGQ9UJW2 476 aa13.74□□□□□ -0.21
CPSF1-208ENST00000532560 PCDHGB4Q9UN71 923 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms