RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MAPRE3Q9UPY8 281 aa20.96■□□□□ 0.95
CAPN1-222ENST00000532285 MAST4O15021 2626 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 CACNA1DQ01668 2161 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 IL33O95760 270 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 G6PDP11413 515 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 EFNA1P20827 205 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-222ENST00000532285 MAP3K8P41279 467 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 C21orf58P58505 322 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 PRR5P85299 388 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 CDSNQ15517 529 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 B3GNT6Q6ZMB0 384 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 SZRD1Q7Z422 152 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 FAM83FQ8NEG4 500 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-222ENST00000532285 MGARPQ8TDB4 240 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 ASB5Q8WWX0 329 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 SERHLQ9NQF3 203 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 PNPOQ9NVS9 261 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 ALKBH4Q9NXW9 302 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 ABCG2Q9UNQ0 655 aa20.95■□□□□ 0.94
CAPN1-222ENST00000532285 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 NKX2-2O95096 273 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 KCNH1O95259 989 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 GRNP28799 593 aaKnown RBP20.94■□□□□ 0.94
CAPN1-222ENST00000532285 EVI2BP34910 448 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 PTGER4P35408 488 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 GAS1P54826 345 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 CLDN8P56748 225 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 NUP107P57740 925 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 CRYZQ08257 329 aaKnown RBP20.94■□□□□ 0.94
CAPN1-222ENST00000532285 LSM12Q3MHD2 195 aaKnown RBP20.94■□□□□ 0.94
CAPN1-222ENST00000532285 EIPR1Q53HC9 387 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 NHSL2Q5HYW2 709 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 WIPI1Q5MNZ9 446 aaPredicted RBP20.94■□□□□ 0.94
CAPN1-222ENST00000532285 C1orf185Q5T7R7 199 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 VASNQ6EMK4 673 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 ZCCHC12Q6PEW1 402 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 LRRC34Q8IZ02 419 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 GPR151Q8TDV0 419 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 OR5P2Q8WZ92 322 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 GIMAP5Q96F15 307 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 TIMP4Q99727 224 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 TTYH2Q9BSA4 534 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 BHLHE41Q9C0J9 482 aaPredicted RBP20.94■□□□□ 0.94
CAPN1-222ENST00000532285 THAP1Q9NVV9 213 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 FAM215AQ9Y5M1 114 aa20.94■□□□□ 0.94
CAPN1-222ENST00000532285 FADS1O60427 444 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 GCKP35557 465 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 AGBL2Q5U5Z8 902 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 ATG16L1Q676U5 607 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 RTL6Q6ICC9 239 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 TRIM42Q8IWZ5 723 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 PM20D2Q8IYS1 436 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 ULK2Q8IYT8 1036 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 PSMA8Q8TAA3 256 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 RAB3IL1Q8TBN0 382 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 SLC9A6Q92581 669 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 FAM120BQ96EK7 910 aaKnown RBP20.93■□□□□ 0.94
CAPN1-222ENST00000532285 DUSP26Q9BV47 211 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 NUF2Q9BZD4 464 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 MEAF6Q9HAF1 191 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 SIRT3Q9NTG7 399 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-222ENST00000532285 FAM120CQ9NX05 1096 aaKnown RBP20.93■□□□□ 0.94
CAPN1-222ENST00000532285 RNF6Q9Y252 685 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 SLC6A5Q9Y345 797 aa20.93■□□□□ 0.94
CAPN1-222ENST00000532285 GXYLT2A0PJZ3 443 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 AHRRA9YTQ3 701 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 HNRNPRO43390 633 aaKnown RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 SNNO75324 88 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 GLI4P10075 376 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 CHRNB4P30926 498 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 RFX3P48380 749 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 PRIM2P49643 509 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 CLK3P49761 638 aaKnown RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 MFSD12Q6NUT3 480 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 CAMKMTQ7Z624 323 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 YRDCQ86U90 279 aaKnown RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 OR10Q1Q8NGQ4 319 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 OR14L1PQ8NHC6 308 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 NUDT8Q8WV74 236 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 PIK3R3Q92569 461 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 ABTB1Q969K4 478 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 RMND5BQ96G75 393 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 OR2B2Q9GZK3 357 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 SDHAF3Q9NRP4 125 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 ZCCHC3Q9NUD5 404 aaKnown RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 MRPS18CQ9Y3D5 142 aaKnown RBP20.92■□□□□ 0.94
CAPN1-222ENST00000532285 SNX8Q9Y5X2 465 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 HCFC1P51610 2035 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 PCNX3Q9H6A9 2034 aa20.92■□□□□ 0.94
CAPN1-222ENST00000532285 FAM47E-STBD1D6RA91 191 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 ACTL6AO96019 429 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 ALOX5P09917 674 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 ACP2P11117 423 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 BMP7P18075 431 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 LBPP18428 481 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 SRD5A2P31213 254 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 DIO3P55073 304 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 SF3B4Q15427 424 aaKnown RBP eCLIP20.91■□□□□ 0.94
CAPN1-222ENST00000532285 PGS1Q32NB8 556 aa20.91■□□□□ 0.94
CAPN1-222ENST00000532285 SLC16A11Q8NCK7 471 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms