RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 AKR1E2Q96JD6 320 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 SENP8Q96LD8 212 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 OPRPNQ99935 248 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 TMEM121Q9BTD3 319 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 CABLES2Q9BTV7 478 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 PUS3Q9BZE2 481 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 BARHL1Q9BZE3 327 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ELOVL3Q9HB03 270 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 RAB18Q9NP72 206 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ZDHHC18Q9NUE0 388 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 NUDT4Q9NZJ9 180 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 CTSZQ9UBR2 303 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ANAPC7Q9UJX3 599 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 MRPS33Q9Y291 106 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 GSTK1Q9Y2Q3 226 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 MRPS7Q9Y2R9 242 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 DHRS7Q9Y394 339 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ATP10DQ9P241 1426 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 CARMIL1Q5VZK9 1371 aa2.4□□□□□ -2.02
CD44-234ENST00000531873 IGHV3OR16-10A0A075B7F0 116 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 GSAPA4D1B5 854 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 ZSCAN5BA6NJL1 495 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 CASKO14936 926 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 ARHGEF9O43307 516 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 B3GAT3O94766 335 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 KIAA0754O94854 1291 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 IGF1P05019 195 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 TPSB2P20231 275 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 PBLDP30039 288 aaPredicted RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 RPL4P36578 427 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 TAGLN2P37802 199 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 SLC1A4P43007 532 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 DHPSP49366 369 aaPredicted RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 MFAP2P55001 183 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 EWSR1Q01844 656 aaKnown RBP eCLIP2.4□□□□□ -2.03
CD44-234ENST00000531873 BNIP1Q12981 228 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 EIF2B1Q14232 305 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 RAB35Q15286 201 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 TPSAB1Q15661 275 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 MAPK6Q16659 721 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 CYBRD1Q53TN4 286 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 C2CD6Q53TS8 623 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 ZC2HC1BQ5TFG8 222 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 REG3GQ6UW15 175 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 APOOLQ6UXV4 268 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 CYS1Q717R9 158 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 HSD11B1LQ7Z5J1 315 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 PHC2Q8IXK0 858 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 LINC01561Q8N1V8 128 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 ANKFN1Q8N957 763 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 PNPT1Q8TCS8 783 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 RLN3Q8WXF3 142 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 CRYGNQ8WXF5 182 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 C18orf25Q96B23 403 aaPredicted RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 DNAJA3Q96EY1 480 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 SLC45A3Q96JT2 553 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 ZNF597Q96LX8 424 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 SECISBP2Q96T21 854 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 SYT11Q9BT88 431 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 COMMD4Q9H0A8 199 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 MEPEQ9NQ76 525 aaPredicted RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 DCAF16Q9NXF7 216 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 WWOXQ9NZC7 414 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 RCOR3Q9P2K3 495 aaPredicted RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 CIDEBQ9UHD4 219 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 SMC3Q9UQE7 1217 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 EIF3LQ9Y262 564 aaKnown RBP2.4□□□□□ -2.03
CD44-234ENST00000531873 OR10H1Q9Y4A9 318 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 CPQQ9Y646 472 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 PTCH1Q13635 1447 aa2.4□□□□□ -2.03
CD44-234ENST00000531873 IGHV3OR16-12A0A075B7B8 117 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 C15orf38-AP3S2A0A0A6YYH1 394 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RPL37AP8A6NKH3 93 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 FAM74A7A6NL05 159 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PRR23D1E9PI22 279 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 PDHXO00330 501 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 STX7O15400 261 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 PPIHO43447 177 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 DCXO43602 365 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 TYROBPO43914 113 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 SNNO75324 88 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 STX11O75558 287 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PALMO75781 387 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 IGKV3-20P01619 116 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PRR23D2P0DMB1 279 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 RPS2P15880 293 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 TBXA2RP21731 343 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PCMT1P22061 227 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PSMA2P25787 234 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 MAGEA5P43359 124 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 BDKRB1P46663 353 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 SLC7A2P52569 658 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RIDAP52758 137 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 IL9RQ01113 521 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 PLOD1Q02809 727 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 CD300CQ08708 224 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 LRRC74AQ0VAA2 488 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RIPK1Q13546 671 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 ELAVL3Q14576 367 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms