RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 A8MXE2 369 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 K7EPI3 171 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 TP53I11O14683 189 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 SNPHO15079 494 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 SMAD7O15105 426 aaKnown RBP8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 OR10H2O60403 315 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 KLHL2O95198 593 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 RCBTB2O95199 551 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 TGM6O95932 706 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 FAM58BPP0C7Q3 252 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 NR2F6P10588 404 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 COL6A2P12110 1019 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 ACADSP16219 412 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 MASP1P48740 699 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 STARP49675 285 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 NEK2P51955 445 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 ABCE1P61221 599 aaKnown RBP8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 ATP6V0D1P61421 351 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 DUSP2Q05923 314 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 HIST2H2ACQ16777 129 aaPredicted RBP8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 HIST2H2AA3Q6FI13 130 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 ANGPTL8Q6UXH0 198 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 RINLQ6ZS11 566 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 NET1Q7Z628 596 aaPredicted RBP8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 GALNT12Q8IXK2 581 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 TAGAPQ8N103 731 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 LRRC75A-AS1Q8N1F1 130 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 WDR20Q8TBZ3 569 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 TMEM158Q8WZ71 300 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 STMN2Q93045 179 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 ZNF570Q96NI8 536 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 UCN2Q96RP3 112 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 SFXN3Q9BWM7 321 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 OR2B2Q9GZK3 357 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 OR10A5Q9H207 317 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 SERHLQ9NQF3 203 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 NUDT4Q9NZJ9 180 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 EHD3Q9NZN3 535 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 RNF112Q9ULX5 631 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 MAPRE3Q9UPY8 281 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 CADP27708 2225 aa8.34□□□□□ -1.07
CHMP4A-205ENST00000531158 A0A1W2PNV4 684 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 SLC22A2O15244 555 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 DYRK3O43781 588 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ICOSLGO75144 302 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 UGT2B11O75310 529 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ERN1O75460 977 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PPM1BO75688 479 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CIB2O75838 187 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ACTL6AO96019 429 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CYP4B1P13584 511 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CPA3P15088 417 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 STMN1P16949 149 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 SERPINB1P30740 379 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PGM1P36871 562 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 VHLP40337 213 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 BUD31P41223 144 aaPredicted RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 LHX2P50458 406 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ARFIP1P53367 373 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CLNS1AP54105 237 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CLDN18P56856 261 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 RAB10P61026 200 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 IRF9Q00978 393 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 SRYQ05066 204 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 FAM27E3Q08E93 113 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 BIKQ13323 160 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CAPRIN1Q14444 709 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 TOMM20Q15388 145 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 METTL21CQ5VZV1 264 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 OR52E8Q6IFG1 317 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 TMEM81Q6P7N7 255 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 VWA1Q6PCB0 445 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ZNF474Q6S9Z5 364 aaPredicted RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 FAM111BQ6SJ93 734 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ZYG11AQ6WRX3 759 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ZCCHC23Q6ZST2 131 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 CENPLQ8N0S6 344 aaPredicted RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 C7orf57Q8NEG2 295 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 C17orf47Q8NEP4 570 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 UBE2E3Q969T4 207 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 WFIKKN1Q96NZ8 548 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 SORT1Q99523 831 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PIP5K1AQ99755 562 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PELOQ9BRX2 385 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 ITPAQ9BY32 194 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 LYARQ9NX58 379 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 KLHL28Q9NXS3 571 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 TMEM216Q9P0N5 145 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 STX18Q9P2W9 335 aaKnown RBP8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 OPTCQ9UBM4 332 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 PACSIN3Q9UKS6 424 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 LRRC42Q9Y546 428 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 SVEP1Q4LDE5 3571 aa8.33□□□□□ -1.08
CHMP4A-205ENST00000531158 A0A096LPK6 155 aa8.32□□□□□ -1.08
CHMP4A-205ENST00000531158 SLCO1B7G3V0H7 640 aa8.32□□□□□ -1.08
CHMP4A-205ENST00000531158 G3V2L1 256 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms