RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	C1orf52	Q8N6N3	182 aa	Known RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	RCBTB1	Q8NDN9	531 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	OR10G2	Q8NGC3	310 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	CAPSL	Q8WWF8	208 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	TP53INP1	Q96A56	240 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	ZNF501	Q96CX3	271 aa	Predicted RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	C11orf24	Q96F05	449 aa	Predicted RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	SNX18	Q96RF0	628 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	F2RL3	Q96RI0	385 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	DPH2	Q9BQC3	489 aa	Predicted RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	CDCA4	Q9BXL8	241 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	OR51E2	Q9H255	320 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	TP63	Q9H3D4	680 aa	Predicted RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	DDX31	Q9H8H2	851 aa	Known RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	TPT1P8	Q9HAU6	139 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	SIDT1	Q9NXL6	827 aa	Known RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	CNOT2	Q9NZN8	540 aa	Known RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	CFL2	Q9Y281	166 aa		13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	SNRNP200	O75643	2136 aa	Known RBP	13.65	□□□□□ -0.22
NR1H3-231	ENST00000529540	UNC13C	Q8NB66	2214 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	C1orf226	A1L170	272 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	HYKK	A2RU49	373 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	EFCAB10	A6NFE3	127 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540		B4E171	279 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	TBX6	O95947	436 aa	Predicted RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	PTH	P01270	115 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	STS	P08842	583 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	FOLR1	P15328	257 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	TCEA1	P23193	301 aa	Known RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	TSPAN7	P41732	249 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	NOVA1	P51513	510 aa	Known RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	PDX1	P52945	283 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	SIM1	P81133	766 aa	Predicted RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	LRRC74A	Q0VAA2	488 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPANXN2	Q5MJ10	180 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	COMMD6	Q7Z4G1	85 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	TMPRSS12	Q86WS5	348 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	PPP1R3B	Q86XI6	285 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	STX19	Q8N4C7	294 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	RNF175	Q8N4F7	328 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	KCT2	Q8NC54	265 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	UTP15	Q8TED0	518 aa	Known RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	TPD52L3	Q96J77	140 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	OR6C1	Q96RD1	312 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	SERINC2	Q96SA4	455 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	FEV	Q99581	238 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	SDHC	Q99643	169 aa	Predicted RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	C17orf62	Q9BQA9	187 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZPBP	Q9BS86	351 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	NDC1	Q9BTX1	674 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	NUAK2	Q9H093	628 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	RUBCNL	Q9H714	662 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	THSD1	Q9NS62	852 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	QPCTL	Q9NXS2	382 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	EHD3	Q9NZN3	535 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	CRNN	Q9UBG3	495 aa	Predicted RBP	13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF221	Q9UK13	617 aa		13.64	□□□□□ -0.23
NR1H3-231	ENST00000529540	GNG14	A0A1W2PPG7	69 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SH3D21	A4FU49	640 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SCAMP2	O15127	329 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	P2RX6	O15547	441 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	PCDH7	O60245	1069 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CCNK	O75909	580 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CPSF4	O95639	269 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	KRT8	P05787	483 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SMIM10L1	P0DMW3	83 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	HIST1H1T	P22492	207 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	RPL3	P39023	403 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ALDH9A1	P49189	494 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF763	Q0D2J5	394 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	KCNAB1	Q14722	419 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC9A5	Q14940	896 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	GPR19	Q15760	415 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	HES3	Q5TGS1	186 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ANXA8L1	Q5VT79	327 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	DHRS13	Q6UX07	377 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540		Q6ZPB1	254 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	IKBIP	Q70UQ0	350 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	UBQLNL	Q8IYU4	475 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CLECL1	Q8IZS7	167 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CLIP4	Q8N3C7	705 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC5A8	Q8N695	610 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	C11orf65	Q8NCR3	313 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ADAMTS18	Q8TE60	1221 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	C17orf50	Q8WW18	174 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SMIM10	Q96HG1	83 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	TEFM	Q96QE5	360 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	CENPO	Q9BU64	300 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	DUSP26	Q9BV47	211 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	EBPL	Q9BY08	206 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC7A5P2	Q9GIP4	190 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	C3orf14	Q9HBI5	128 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	LYAR	Q9NX58	379 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	MS4A12	Q9NXJ0	267 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	NDUFAF4	Q9P032	175 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	ENOPH1	Q9UHY7	261 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPACA6	W5XKT8	324 aa		13.63	□□□□□ -0.23
NR1H3-231	ENST00000529540	EP300	Q09472	2414 aa	Predicted RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms