RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 OR2M7Q8NG81 312 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 OR7G1Q8NGA0 311 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 OR52N2Q8NGI0 321 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 SLC22A8Q8TCC7 542 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 PAQR8Q8TEZ7 354 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 KLHL29Q96CT2 875 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 SGCZQ96LD1 299 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 UCN2Q96RP3 112 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 GAL3ST4Q96RP7 486 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 SMC6Q96SB8 1091 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 TRMOQ9BU70 441 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 FAIM2Q9BWQ8 316 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 EBPLQ9BY08 206 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 IQCGQ9H095 443 aaKnown RBP7.75□□□□□ -1.17
SSBP3-212ENST00000528930 TUBB1Q9H4B7 451 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 PROK2Q9HC23 129 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 UTS2RQ9UKP6 389 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 PSME2Q9UL46 239 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 EXO1Q9UQ84 846 aaKnown RBP7.75□□□□□ -1.17
SSBP3-212ENST00000528930 DTX4Q9Y2E6 619 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 PTGDR2Q9Y5Y4 395 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 DNAJC13O75165 2243 aa7.75□□□□□ -1.17
SSBP3-212ENST00000528930 ANKRD33BA6NCL7 494 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 A6NNC1 897 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 G3V3Y1 287 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 CRCPO75575 148 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 CBX7O95931 251 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 CHRNGP07510 517 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 BPGMP07738 259 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 DDCP20711 480 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 GPX3P22352 226 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 RBMXP38159 391 aaKnown RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 GSTM5P46439 218 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 DNASE1L1P49184 302 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 IDH3AP50213 366 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 MRPS35P82673 323 aaKnown RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 C2orf80Q0P641 193 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 RIPK1Q13546 671 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 HEPACAMQ14CZ8 416 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 EXOSC7Q15024 291 aaKnown RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 LTB4RQ15722 352 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 NTRK2Q16620 822 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 KRT71Q3SY84 523 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF628Q5EBL2 1059 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ARL13AQ5H913 290 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 SLC22A10Q63ZE4 541 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 KANK2Q63ZY3 851 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 FAM71E1Q6IPT2 247 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 NOXRED1Q6NXP6 359 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 LRIG3Q6UXM1 1119 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 TMEM64Q6YI46 380 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZCCHC23Q6ZST2 131 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 EXOC3L1Q86VI1 746 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 EID3Q8N140 333 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 GHDCQ8N2G8 530 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 LRRC25Q8N386 305 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 C17orf47Q8NEP4 570 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ADCY4Q8NFM4 1077 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 OR2T11Q8NH01 316 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF675Q8TD23 568 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 NTNG2Q96CW9 530 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 SPACA9Q96E40 222 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 METTL2AQ96IZ6 378 aaKnown RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZIM3Q96PE6 472 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 FAM173AQ9BQD7 235 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 TTTY12Q9BZ98 90 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 BRINP2Q9C0B6 783 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 AMBRA1Q9C0C7 1298 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 PLEKHF2Q9H8W4 249 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZDHHC11Q9H8X9 412 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 SACM1LQ9NTJ5 587 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 TUBA8Q9NY65 449 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 EHD3Q9NZN3 535 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 SENP1Q9P0U3 644 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 RNF6Q9Y252 685 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 WBP11Q9Y2W2 641 aaKnown RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 POLR3HQ9Y535 204 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 DNAJC15Q9Y5T4 150 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 CHCHD2Q9Y6H1 151 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF780BQ9Y6R6 833 aa7.74□□□□□ -1.17
SSBP3-212ENST00000528930 MYO1GB0I1T2 1018 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 HMGB1P1B2RPK0 211 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-212ENST00000528930 TMEM233B4DJY2 109 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 F8W735 103 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-212ENST00000528930 J3QW42 95 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 SLC28A1O00337 649 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 TFECO14948 347 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-212ENST00000528930 RGS16O15492 202 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-212ENST00000528930 SEC22BO75396 215 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 FAM107AO95990 144 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 P04436 131 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 PCSK2P16519 638 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 EGR1P18146 543 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 TACR1P25103 407 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 PIGAP37287 484 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 EMDP50402 254 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 PPIAP62937 165 aaKnown RBP7.73□□□□□ -1.17
SSBP3-212ENST00000528930 GNGT1P63211 74 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF763Q0D2J5 394 aa7.73□□□□□ -1.17
SSBP3-212ENST00000528930 MPP2Q14168 576 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms