RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ARAFP10398 606 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PIGAP37287 484 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CCL11P51671 97 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 UCNP55089 124 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ACTR3P61158 418 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 RAPSNQ13702 412 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ARHGAP11BQ3KRB8 267 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CYP27C1Q4G0S4 372 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SAMD4BQ5PRF9 694 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 DCST2Q5T1A1 773 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 LYPD8Q6UX82 237 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 C16orf62Q7Z3J2 963 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZAR1Q86SH2 424 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SLC5A8Q8N695 610 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 BCORP1Q8N888 145 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CHDHQ8NE62 594 aaPredicted RBP11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 FAM110BQ8TC76 370 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 TMBIM1Q969X1 311 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 HSPBAP1Q96EW2 488 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 REXO5Q96IC2 774 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 RASL10BQ96S79 203 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SDF2Q99470 211 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 EXD2Q9NVH0 621 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 THUMPD1Q9NXG2 353 aaKnown RBP11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PCDHGB3Q9Y5G1 929 aa11.21□□□□□ -0.61
TRAF3IP2-211ENST00000528599 FAM220BPB1ANY3 271 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FCMRO60667 390 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SOX30O94993 753 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZIC2O95409 532 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 BCHEP06276 602 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CHRM4P08173 479 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NR2F1P10589 423 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HSD17B1P14061 328 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TCN1P20061 433 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ABCD3P28288 659 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MSX2P35548 267 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 KPNB1Q14974 876 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 VMACQ2NL98 169 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ACER2Q5QJU3 275 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 DESI1Q6ICB0 168 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PCSK4Q6UW60 755 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MICU2Q8IYU8 434 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NFKBIDQ8NI38 313 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 WDR60Q8WVS4 1066 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 OMA1Q96E52 524 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 KCTD14Q9BQ13 255 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 LIPT1Q9Y234 373 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 YARS2Q9Y2Z4 477 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NPFFR2Q9Y5X5 522 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC28A2O43868 658 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TSPAN2O60636 221 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 DNAJA2O60884 412 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 H6PDO95479 791 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 IL33O95760 270 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ALPPP05187 535 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PCGF2P35227 344 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RFX3P48380 749 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NRG3P56975 720 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CDK6Q00534 326 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RBBP4Q09028 425 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PLCXD2Q0VAA5 305 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SCARB2Q14108 478 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 DECR1Q16698 335 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF630Q2M218 657 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GPAT3Q53EU6 434 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF468Q5VIY5 522 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 AAGABQ6PD74 315 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HPS6Q86YV9 775 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TAGAPQ8N103 731 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FBXW8Q8N3Y1 598 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC15A4Q8N697 577 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 C11orf65Q8NCR3 313 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FDCSPQ8NFU4 85 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 EFHD2Q96C19 240 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TRNT1Q96Q11 434 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC38A1Q9H2H9 487 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF552Q9H707 407 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GPR83Q9NYM4 423 aa11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NKX1-2Q9UD57 310 aaPredicted RBP11.2□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CFAP46Q8IYW2 2715 aa11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ELOVL7A1L3X0 281 aa11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GCM2O75603 506 aaPredicted RBP11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 REM1O75628 298 aa11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CEACAM4O75871 244 aa11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 OR6B1O95007 311 aa11.19□□□□□ -0.62
TRAF3IP2-211ENST00000528599 AK1P00568 194 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms