RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LGI1O95970 557 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 IL1AP01583 271 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 CEACAM5P06731 702 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 CPEP16870 476 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 ACADLP28330 430 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 BSGP35613 385 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 RPS5P46782 204 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 MAPK12P53778 367 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 CAV3P56539 151 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 PCBP4P57723 403 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 BNC1Q01954 994 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 C1DQ13901 141 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 GINS1Q14691 196 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.2□□□□□ -0.463e-10■□□□□ 11
RBM39-243ENST00000528062 C11orf74Q86VG3 221 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 OR5D16Q8NGK9 328 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 EXOSC8Q96B26 276 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 OTUB1Q96FW1 271 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 DIRAS2Q96HU8 199 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 DEPDC7Q96QD5 511 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 POLDIP3Q9BY77 421 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 SLC22A4Q9H015 551 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 FGF22Q9HCT0 170 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 LHX9Q9NQ69 397 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 RALGAPA1Q6GYQ0 2036 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SH3BP5O60239 455 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 EPPINO95925 133 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CD79BP40259 229 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 KIR2DL3P43628 341 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 KIAA1024LP59773 190 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 EFNB1P98172 346 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 DMPKQ09013 629 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 NFATC4Q14934 902 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 XKRXQ6PP77 449 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 RDH10Q8IZV5 341 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 OR5AR1Q8NGP9 310 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SMPDL3AQ92484 453 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 TM9SF2Q99805 663 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 PLA2G12AQ9BZM1 189 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CTPS2Q9NRF8 586 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SEC14L3Q9UDX4 400 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 KLF15Q9UIH9 416 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SNX7Q9UNH6 387 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SLC17A4Q9Y2C5 497 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 PRKAB1Q9Y478 270 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CCDC88CQ9P219 2028 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 WASHC1A8K0Z3 465 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SEC14L5O43304 696 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SLC28A2O43868 658 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 TMPRSS11DO60235 418 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 RAB36O95755 333 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 HOXC4P09017 264 aaPredicted RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 THEGLP0DJG4 465 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 OR12D1P0DN82 309 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CD38P28907 300 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 GPC1P35052 558 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 GIPRP48546 466 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CSNK1EP49674 416 aaKnown RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 KHDRBS2Q5VWX1 349 aaKnown RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 WASH2PQ6VEQ5 465 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 KIF18BQ86Y91 864 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CLDN22Q8N7P3 220 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 AMER3Q8N944 861 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 OR4K5Q8NGD3 323 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 TEFMQ96QE5 360 aaKnown RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 KATNB1Q9BVA0 655 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 CUEDC1Q9NWM3 386 aaPredicted RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 FBXW2Q9UKT8 454 aa12.19□□□□□ -0.46
RBM39-243ENST00000528062 SF3B6Q9Y3B4 125 aaKnown RBP12.19□□□□□ -0.46
RBM39-243ENST00000528062 A0A1W2PRQ8 180 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 CCDC182A6NF36 153 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 POLR1CO15160 346 aaPredicted RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 TMCC2O75069 709 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 POP7O75817 140 aaKnown RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 PTGER1P34995 402 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 ALDH6A1Q02252 535 aaKnown RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 FZD2Q14332 565 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 WDR45BQ5MNZ6 344 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 C11orf96Q7Z7L8 435 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 IQCHQ86VS3 1027 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 TRIM48Q8IWZ4 208 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 VWA5B2Q8N398 1253 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 TBC1D19Q8N5T2 526 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 OR52P1PQ8NH57 321 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 OR1E3Q8WZA6 343 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 UBE2E3Q969T4 207 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 FSCN3Q9NQT6 498 aa12.18□□□□□ -0.46
RBM39-243ENST00000528062 PHPT1Q9NRX4 125 aaPredicted RBP12.18□□□□□ -0.46
RBM39-243ENST00000528062 TM7SF3Q9NS93 570 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms