RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 IL18R1Q13478 541 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 GGTLC2Q14390 218 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 NFE2L1Q14494 772 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 HEPACAMQ14CZ8 416 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 STXBP2Q15833 593 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 MPP7Q5T2T1 576 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 PIWIL3Q7Z3Z3 882 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 GPR142Q7Z601 462 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 TMEM110Q86TL2 294 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 SNX32Q86XE0 403 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF615Q8N8J6 731 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 C20orf203Q8NBC4 194 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 LEMD2Q8NC56 503 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 LPCAT1Q8NF37 534 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 FIBINQ8TAL6 211 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF596Q8TC21 504 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 FNDC8Q8TC99 324 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ARNTL2Q8WYA1 636 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ATP6V0A1Q93050 837 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ULK4Q96C45 1275 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 CDKN2AIPNLQ96HQ2 116 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 SMIM14Q96QK8 99 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 RASL10BQ96S79 203 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 MBOAT4Q96T53 435 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 PARK7Q99497 189 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ANP32EQ9BTT0 268 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 NUSAP1Q9BXS6 441 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 MRPL9Q9BYD2 267 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 MMADHCQ9H3L0 296 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 SRD5A3Q9H8P0 318 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 APMAPQ9HDC9 416 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 NRN1Q9NPD7 142 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 COMMD8Q9NX08 183 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 CHCHD3Q9NX63 227 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 MOSPD1Q9UJG1 213 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 FBXW2Q9UKT8 454 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ISY1Q9ULR0 285 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 BARX2Q9UMQ3 279 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 ERVK-19Q9WJR5 959 aa1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 RPH3AQ9Y2J0 694 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-219ENST00000526299 A0A0J9YXY3 114 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 A4D1N5 150 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TRIM64A6NGJ6 449 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TRIM64BA6NI03 449 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZSCAN5BA6NJL1 495 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 NBR2O15453 112 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TTI1O43156 1089 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SLC7A4O43246 635 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TBL1XO60907 577 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ATP9AO75110 1047 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ATP6V1G1O75348 118 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SLC16A8O95907 504 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 PCCAP05165 728 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SFTPBP07988 381 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SERPINF2P08697 491 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 UROSP10746 265 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 IL10P22301 178 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 PTBP1P26599 531 aaKnown RBP eCLIP1.17□□□□□ -2.225e-10■■■■□ 20.2
ECHDC1-219ENST00000526299 MARCKSP29966 332 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 STIP1P31948 543 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ATP6V1E1P36543 226 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 LONP1P36776 959 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 CASP3P42574 277 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 NUMBP49757 651 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 CDKL1Q00532 357 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF85Q03923 595 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SLC34A1Q06495 639 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 PPP1R8Q12972 351 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TSTA3Q13630 321 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 CDC37Q16543 378 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 C1QTNF12Q5T7M4 302 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 MEDAGQ5VYS4 303 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 UFSP1Q6NVU6 142 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 IYDQ6PHW0 289 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 CD164L2Q6UWJ8 174 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 BRD3OSQ6XYD6 125 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 GBP6Q6ZN66 633 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TOM1L2Q6ZVM7 507 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 KCTD9Q7L273 389 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF429Q86V71 674 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 CCDC83Q8IWF9 413 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 KLHDC8AQ8IYD2 350 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 THEM5Q8N1Q8 247 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 Q8NFD4 153 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF578Q96N58 590 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 NAP1L3Q99457 506 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 FAM213AQ9BRX8 229 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF2Q9BSG1 426 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TM2D1Q9BX74 207 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF350Q9GZX5 532 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 ABCG8Q9H221 673 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 TSPY26PQ9H489 355 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 DBNDD1Q9H9R9 158 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 PRMT8Q9NR22 394 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 MMP26Q9NRE1 261 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 SEPT10Q9P0V9 454 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 DNAJB9Q9UBS3 223 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 MAD2L2Q9UI95 211 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 LCMT1Q9UIC8 334 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 STX8Q9UNK0 236 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms