RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 C3orf30Q96M34 536 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 SLC30A2Q9BRI3 323 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 C7orf50Q9BRJ6 194 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 RAB11FIP5Q9BXF6 653 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 DUSP16Q9BY84 665 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 LRRN3Q9H3W5 708 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 C5orf66Q9H5L9 145 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 IMP3Q9NV31 184 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 PLEK2Q9NYT0 353 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 B3GAT1Q9P2W7 334 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 PLEKHB1Q9UF11 243 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 CLEC2DQ9UHP7 191 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 RNF6Q9Y252 685 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 PLLPQ9Y342 182 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 STARD10Q9Y365 291 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 SAMHD1Q9Y3Z3 626 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 SCAF11Q99590 1463 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 NLRP1Q9C000 1473 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 KAT6AQ92794 2004 aa4.09□□□□□ -1.76
CD44-213ENST00000525209 TRBV5-7A0A0A0MS05 114 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 A0A0G2JLW4 131 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ATP6AP2A0A1C7CYW4 349 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 A0A1W2PPC1 479 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 HYKKA2RU49 373 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 LRRC30A6NM36 301 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ARHGEF33A8MVX0 844 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 FAM90A26D6RGX4 464 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 PRAMEF26H0Y7S4 382 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 CYB561D2O14569 222 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 CLOCKO15516 846 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 OR10H3O60404 316 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 LPXNO60711 386 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MFAP3LO75121 409 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 OR2J3O76001 311 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 NEURL1O76050 574 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 VTNP04004 478 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 DCNP07585 359 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 UBCP0CG48 685 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 UNGP13051 313 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 UQCRBP14927 111 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MSH3P20585 1137 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 FPR3P25089 353 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GJB2P29033 226 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GDNFP39905 211 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 EIF2S3P41091 472 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 LRPPRCP42704 1394 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 NKX2-1P43699 371 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 TUFMP49411 452 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 STK19P49842 368 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 PGGT1BP53609 377 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ATP1B3P54709 279 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 PSMD4P55036 377 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 PPP2CBP62714 309 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 HERVK_113P63132 956 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ERVK-8P63133 956 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 PPP2CAP67775 309 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 CXADRP78310 365 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ADARB1P78563 741 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 OGDHQ02218 1023 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 IFFO1Q0D2I5 559 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MESP2Q0VG99 397 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GRB14Q14449 540 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 EEA1Q15075 1411 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GOLGA7BQ2TAP0 167 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ACSF3Q4G176 576 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 KLHL22Q53GT1 634 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 UMODL1Q5DID0 1318 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 RNASE12Q5GAN4 147 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 KIAA1755Q5JYT7 1200 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ZNF691Q5VV52 312 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SLX4IPQ5VYV7 408 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SLC22A10Q63ZE4 541 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 FRG2Q64ET8 278 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 TUBA3EQ6PEY2 450 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 UQCC3Q6UW78 93 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MAP3K15Q6ZN16 1313 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 DEF8Q6ZN54 512 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ATG4DQ86TL0 474 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 COMMD2Q86X83 199 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SFR1Q86XK3 245 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 CATSPERDQ86XM0 798 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 LDLRAD3Q86YD5 345 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GPSM1Q86YR5 675 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SFTPA2Q8IWL1 248 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GPR135Q8IZ08 494 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 TMEM99Q8N816 258 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 C8orf31Q8N9H6 132 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ZNF680Q8NEM1 530 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SDR9C7Q8NEX9 313 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 OR4K1Q8NGD4 311 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 OR1F12Q8NHA8 337 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 NANPQ8TBE9 248 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ESR2Q92731 530 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 NAT6Q93015 286 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ERGIC1Q969X5 290 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ZBTB8AQ96BR9 441 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 C8orf44Q96CB5 159 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms