RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 EIF1AXP47813 144 aaKnown RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PNLIPRP2P54317 469 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 CLDN18P56856 261 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 NKX6-1P78426 367 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 HMGCS1Q01581 520 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 FOXF2Q12947 444 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 EFR3AQ14156 821 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 TTC19Q6DKK2 380 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 OR2A2Q6IF42 318 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 COMMD6Q7Z4G1 85 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 MILR1Q7Z6M3 343 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 CCDC25Q86WR0 208 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 SAMD14Q8IZD0 417 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PLD6Q8N2A8 252 aaKnown RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PTGR2Q8N8N7 351 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 OR4F6Q8NGB9 312 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 OR14L1PQ8NHC6 308 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PIGTQ969N2 578 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 ARSGQ96EG1 525 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 CNRIP1Q96F85 164 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 COL21A1Q96P44 957 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 FAIM2Q9BWQ8 316 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 BRINP2Q9C0B6 783 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 ACSS3Q9H6R3 686 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 GRPEL1Q9HAV7 217 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 GALNT9Q9HCQ5 603 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 NMRK1Q9NWW6 199 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 KLRF1Q9NZS2 232 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 TRPS1Q9UHF7 1281 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 BCAP29Q9UHQ4 241 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PACSIN3Q9UKS6 424 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 SNX6Q9UNH7 406 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 EIF3LQ9Y262 564 aaKnown RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 PLLPQ9Y342 182 aa7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 CHD3Q12873 2000 aaKnown RBP7.57□□□□□ -1.2
DEPDC1-205ENST00000525124 ABCA2Q9BZC7 2435 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ARID1AO14497 2285 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 A0A1W2PNV4 684 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 PLOD2O00469 737 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CASKO14936 926 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CTIFO43310 598 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SMIM24O75264 130 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ERAL1O75616 437 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SLITRK5O94991 958 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 OTCP00480 354 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 PDYNP01213 254 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CT45A8P0DMV1 189 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CT45A9P0DMV2 189 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 PEPDP12955 493 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 FPR1P21462 350 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CRYGSP22914 178 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CNTFP26441 200 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ADSLP30566 484 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 FEN1P39748 380 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CPA2P48052 419 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SERPINB9P50453 376 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 AGFG1P52594 562 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 GAS1P54826 345 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 DSCR4P56555 118 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 MRPS22P82650 360 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 MRPS25P82663 173 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 DUSP2Q05923 314 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 C2orf54Q08AI8 447 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CSTF3Q12996 717 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 FGFBP1Q14512 234 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 GANABQ14697 944 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 EXOSC7Q15024 291 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 TRMT12Q53H54 448 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 CT45A2Q5DJT8 189 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ZNF628Q5EBL2 1059 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 LUZP2Q86TE4 346 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 OR52R1Q8NGF1 315 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ZNF483Q8TF39 744 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SLC44A1Q8WWI5 657 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SELENOMQ8WWX9 145 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 INTS12Q96CB8 462 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 KLHL29Q96CT2 875 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 PHF21BQ96EK2 531 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 COX4I2Q96KJ9 171 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 VSTM2LQ96N03 204 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 STMN4Q9H169 189 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ELOVL6Q9H5J4 265 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SERHLQ9NQF3 203 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ZDHHC18Q9NUE0 388 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ELOVL5Q9NYP7 299 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 TAS2R10Q9NYW0 307 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 MCM8Q9UJA3 840 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 NFU1Q9UMS0 254 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 SLC12A4Q9UP95 1085 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 MAPRE3Q9UPY8 281 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ZNF780BQ9Y6R6 833 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
DEPDC1-205ENST00000525124 ZIC3O60481 467 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 PLOD3O60568 738 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 TMCC2O75069 709 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 IFI6P09912 130 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 CD8BP10966 210 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 CD79BP40259 229 aa7.55□□□□□ -1.2
DEPDC1-205ENST00000525124 ARL1P40616 181 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms