RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 DCDC1P59894 354 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 KRTAP10-1P60331 282 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 RPL26P61254 145 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 DCAF7P61962 342 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 AP1S1P61966 158 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 OLR1P78380 273 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZBED6P86452 979 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 GCNT1Q02742 428 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DMTNQ08495 405 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TMEM115Q12893 351 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 CSTF3Q12996 717 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 UBE2V1Q13404 147 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 NFATC2Q13469 925 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DCTN2Q13561 401 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 DPYSQ14117 519 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 IRF4Q15306 451 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ADIPOQQ15848 244 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 WSCD2Q2TBF2 565 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PARP15Q460N3 678 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PRR30Q53SZ7 412 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 DNAJC21Q5F1R6 531 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 TPRG1LQ5T0D9 272 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 KIAA0930Q6ICG6 404 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 SCIMPQ6UWF3 145 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ABRAXAS1Q6UWZ7 409 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TMEM26Q6ZUK4 368 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 GPRIN3Q6ZVF9 776 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TAF8Q7Z7C8 310 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TMEM110Q86TL2 294 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DNAAF5Q86Y56 855 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 SIAH3Q8IW03 269 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 GPALPP1Q8IXQ4 340 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZNF683Q8IZ20 524 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 SIX6OS1Q8N1H7 587 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TEX29Q8N6K0 151 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PAF1Q8N7H5 531 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TMEM116Q8NCL8 245 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 C1orf131Q8NDD1 294 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 WFDC5Q8TCV5 224 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DQX1Q8TE96 717 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 CA5BP1Q8WTZ4 195 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 OR1E3Q8WZA6 343 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 RAD54LQ92698 747 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.36□□□□□ -2.19
CD44-212ENST00000524922 PTERQ96BW5 349 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 INTS12Q96CB8 462 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 C19orf60Q96EN9 201 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PDXPQ96GD0 296 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 COX14Q96I36 57 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 MAGED4Q96JG8 741 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 GDAP1L1Q96MZ0 367 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZFP3Q96NJ6 502 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DACH2Q96NX9 599 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 WDFY2Q96P53 400 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 OR2M4Q96R27 311 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 FAM213AQ9BRX8 229 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TIMM29Q9BSF4 260 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TRPM6Q9BX84 2022 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 CARD9Q9H257 536 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 SEMA6AQ9H2E6 1030 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DPEP2Q9H4A9 486 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DPEP3Q9H4B8 488 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZDHHC6Q9H6R6 413 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PLEKHF2Q9H8W4 249 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 LRTM1Q9HBL6 345 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 POPDC2Q9HBU9 364 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 AGPAT3Q9NRZ7 376 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 BLOC1S4Q9NUP1 217 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZNF701Q9NV72 531 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 C14orf105Q9NVL8 296 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DMAC2Q9NW81 257 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 CWC15Q9P013 229 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 SEC14L3Q9UDX4 400 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 AMACRQ9UHK6 382 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TEKT2Q9UIF3 430 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 VPS28Q9UK41 221 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 RPL26L1Q9UNX3 145 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 CAMK2AQ9UQM7 478 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TRAF3IP3Q9Y228 551 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 NTNG1Q9Y2I2 539 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 KLK4Q9Y5K2 254 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 VWFP04275 2813 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 HRNRQ86YZ3 2850 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 DNAH1Q9P2D7 4330 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 GTF3C1Q12789 2109 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 MYH10P35580 1976 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LOC102723996A0A087X1L8 192 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TRGV8A0A0C4DH27 118 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 A0A1B0GVC2 190 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ARGFXA6NJG6 315 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 VSTM2BA6NLU5 285 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR6C76A6NM76 312 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 YJEFN3A6XGL0 299 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ANKRD63C9JTQ0 380 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 O00370 1275 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PDXKO00764 312 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TRAFD1O14545 582 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 BCKDKO14874 412 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CHUKO15111 745 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms