RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MND1	Q9BWT6	205 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	SGPP1	Q9BX95	441 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	UCK2	Q9BZX2	261 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	SYNDIG1	Q9H7V2	258 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF556	Q9HAH1	456 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRIM39	Q9HCM9	518 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	FGF20	Q9NP95	211 aa	Predicted RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ACOXL	Q9NUZ1	547 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	PLEKHB1	Q9UF11	243 aa	Predicted RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CLEC2D	Q9UHP7	191 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ACSL6	Q9UKU0	697 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	SNX7	Q9UNH6	387 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	DIMT1	Q9UNQ2	313 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	SH2B3	Q9UQQ2	575 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ATG2B	Q96BY7	2078 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MYOF	Q9NZM1	2061 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	KALRN	O60229	2985 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	NIN	Q8N4C6	2090 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CKAP5	Q14008	2032 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	MGAT4D	A6NG13	374 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033		A8MX80	341 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM227A	F5H4B4	570 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	LINC01387	J3KSC0	135 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	POLR1C	O15160	346 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	PLA2G10	O15496	165 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	HCN1	O60741	890 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SEMA7A	O75326	666 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	KRT75	O95678	551 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CAT	P04040	527 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	YES1	P07947	543 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	HSMCR30	P0CW71	290 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CKMT1A	P12532	417 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	UQCRC2	P22695	453 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SOX3	P41225	446 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	FRK	P42685	505 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	ADPRH	P54922	357 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	DSTN	P60981	165 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CYP4F2	P78329	520 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	DDX39B	Q13838	428 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SEC23B	Q15437	767 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPHAR	Q15513	63 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	GPAT3	Q53EU6	434 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCDC157	Q569K6	752 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	C3orf38	Q5JPI3	329 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC35F1	Q5T1Q4	408 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF648	Q5T619	568 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	TIGD3	Q6B0B8	471 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	PGBD2	Q6P3X8	592 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CD200R1L	Q6Q8B3	271 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	HSDL2	Q6YN16	418 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	QSOX2	Q6ZRP7	698 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	NANOGNB	Q7Z5D8	188 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	HSD11B1L	Q7Z5J1	315 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	NOXA1	Q86UR1	476 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	RAVER1	Q8IY67	606 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR8H2	Q8N162	312 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM26E	Q8N5C1	309 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR4K1	Q8NGD4	311 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR8J1	Q8NGP2	316 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	VANGL1	Q8TAA9	524 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	WDR48	Q8TAF3	677 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR8D1	Q8WZ84	308 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CIDEC	Q96AQ7	238 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	PPCDC	Q96CD2	204 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	NEURL3	Q96EH8	262 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	PPP1R16A	Q96I34	528 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	ELF4	Q99607	663 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	MDFI	Q99750	246 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	EFCAB11	Q9BUY7	163 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	TSSK6	Q9BXA6	273 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	POLDIP3	Q9BY77	421 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	ROGDI	Q9GZN7	287 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC22A4	Q9H015	551 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	C11orf54	Q9H0W9	315 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPNS1	Q9H2V7	528 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCDC86	Q9H6F5	360 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	CXorf36	Q9H7Y0	433 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	NIPAL2	Q9H841	368 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	TXNL4B	Q9NX01	149 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	DNAJC27	Q9NZQ0	273 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	TES	Q9UGI8	421 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC25A13	Q9UJS0	675 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	RPL36	Q9Y3U8	105 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	SNX8	Q9Y5X2	465 aa		7.34	□□□□□ -1.23
SPIDR-223	ENST00000524033	MAP1B	P46821	2468 aa	Known RBP	7.34	□□□□□ -1.24
SPIDR-223	ENST00000524033	CACNA1B	Q00975	2339 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	IGF2R	P11717	2491 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1B0GTQ1	180 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	PIPSL	A2A3N6	862 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	CENPX	A8MT69	81 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	LAT	O43561	262 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TSPAN6	O43657	245 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	B4GALT2	O60909	372 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	MFN2	O95140	757 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	POP4	O95707	220 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC16A8	O95907	504 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	WNT1	P04628	370 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	IFNW1	P05000	195 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	CLEC2L	P0C7M8	214 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms