RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 RFX3P48380 749 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 MRPL19P49406 292 aaKnown RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 DGKQP52824 942 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 IRX1P78414 480 aaPredicted RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 UBAP2LQ14157 1087 aaKnown RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 DUSP5Q16690 384 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 C4orf17Q53FE4 359 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 EXOSC6Q5RKV6 272 aaKnown RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 TIGD3Q6B0B8 471 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ARHGAP11AQ6P4F7 1023 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ANKRD46Q86W74 232 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 MIER2Q8N344 545 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 COX18Q8N8Q8 333 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 OR1J4Q8NGS1 313 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 OR5AK3PQ8NH89 298 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ADAMTS15Q8TE58 950 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 RNF138Q8WVD3 245 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 PIK3R3Q92569 461 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 CHMP6Q96FZ7 201 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 CCDC115Q96NT0 180 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 OR52E6Q96RD3 313 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 EBF4Q9BQW3 602 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 SIKE1Q9BRV8 207 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 PIGUQ9H490 435 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ABCG2Q9UNQ0 655 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 SLC5A6Q9Y289 635 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 ZNF835Q9Y2P0 537 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 PCDHGB3Q9Y5G1 929 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 NUP214P35658 2090 aaPredicted RBP11.46□□□□□ -0.57
CCNC-216ENST00000523961 NINQ8N4C6 2090 aa11.46□□□□□ -0.57
CCNC-216ENST00000523961 EXPH5Q8NEV8 1989 aa11.46□□□□□ -0.58
CCNC-216ENST00000523961 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 RNF103-CHMP3A0A140T963 221 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 A0A1B0GTH9 108 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 GNB5O14775 395 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 HCN1O60741 890 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 PDE9AO76083 593 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 KCNK2O95069 426 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 RFPL3SP0C7P2 107 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 GDF1P27539 372 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 LCN1P31025 176 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 EVI2BP34910 448 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 PTGS2P35354 604 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 CLK3P49761 638 aaKnown RBP11.45□□□□□ -0.58
CCNC-216ENST00000523961 POU6F2P78424 691 aaPredicted RBP11.45□□□□□ -0.58
CCNC-216ENST00000523961 HSF1Q00613 529 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 SRSF1Q07955 248 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCNC-216ENST00000523961 FNDC7Q5VTL7 733 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 ANGPTL8Q6UXH0 198 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 Q6ZPB1 254 aaPredicted RBP11.45□□□□□ -0.58
CCNC-216ENST00000523961 C6orf120Q7Z4R8 191 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 CHERPQ8IWX8 916 aaKnown RBP11.45□□□□□ -0.58
CCNC-216ENST00000523961 TRIML2Q8N7C3 387 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 GOT1L1Q8NHS2 421 aaPredicted RBP11.45□□□□□ -0.58
CCNC-216ENST00000523961 FAM110BQ8TC76 370 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 GNRHR2Q96P88 292 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 BTBD2Q9BX70 525 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 LDAHQ9H6V9 325 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 GALNT9Q9HCQ5 603 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 ACKR4Q9NPB9 350 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 C15orf41Q9Y2V0 281 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 WIF1Q9Y5W5 379 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 BAHCC1Q9P281 2608 aa11.45□□□□□ -0.58
CCNC-216ENST00000523961 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 TRGV5A0A0B4J1U4 118 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 A0A1B0GVC2 190 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 FAM234BA2RU67 622 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 DUXAA6NLW8 204 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 PRRG2O14669 202 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 LRRTM2O43300 516 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 SUSD5O60279 629 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 FADS1O60427 444 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 SEMA7AO75326 666 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 UTS2O95399 124 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 IGKV1D-16P01601 117 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCNC-216ENST00000523961 MATN1P21941 496 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 CA7P43166 264 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 MAN2A2P49641 1150 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 POLR2JP52435 117 aaKnown RBP11.44□□□□□ -0.58
CCNC-216ENST00000523961 PER3P56645 1201 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCNC-216ENST00000523961 C1QL3Q5VWW1 255 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 FIGNL1Q6PIW4 674 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 MSANTD1Q6ZTZ1 278 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 TRILQ7L0X0 811 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 PLCZ1Q86YW0 608 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 CDS1Q92903 461 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 RELTQ969Z4 430 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
CCNC-216ENST00000523961 OTUB1Q96FW1 271 aaPredicted RBP11.44□□□□□ -0.58
CCNC-216ENST00000523961 SLC35G5Q96KT7 338 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 PANX1Q96RD7 426 aa11.44□□□□□ -0.58
CCNC-216ENST00000523961 G6PC3Q9BUM1 346 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms