RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PON3Q15166 354 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 BEX5Q5H9J7 111 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 SH2D5Q6ZV89 423 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 C1orf52Q8N6N3 182 aaKnown RBP20.44■□□□□ 0.86
PVT1-218ENST00000523328 OR9A2Q8NGT5 310 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 SELENOMQ8WWX9 145 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 NANOS1Q8WY41 292 aaKnown RBP20.44■□□□□ 0.86
PVT1-218ENST00000523328 CR1P17927 2039 aa20.44■□□□□ 0.86
PVT1-218ENST00000523328 PPP6CO00743 305 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 SCO2O43819 266 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 EVI2BP34910 448 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 SERPINB8P50452 374 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 CLDN20P56880 219 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 TNK1Q13470 666 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 TRADDQ15628 312 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 LETMD1Q6P1Q0 360 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 ZDHHC24Q6UX98 284 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 ZNF704Q6ZNC4 412 aaPredicted RBP20.43■□□□□ 0.86
PVT1-218ENST00000523328 FAM214BQ7L5A3 538 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 SLC44A2Q8IWA5 706 aaPredicted RBP20.43■□□□□ 0.86
PVT1-218ENST00000523328 VPS11Q9H270 941 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 CXorf56Q9H5V9 222 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 PFDN4Q9NQP4 134 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 MED11Q9P086 117 aa20.43■□□□□ 0.86
PVT1-218ENST00000523328 OR2M5A3KFT3 312 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 TMCC2O75069 709 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 AQP8O94778 261 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 PLAUP00749 431 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 RPS17P08708 135 aaKnown RBP20.42■□□□□ 0.86
PVT1-218ENST00000523328 ATP5J2P56134 94 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 CAV1Q03135 178 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 GANABQ14697 944 aaKnown RBP20.42■□□□□ 0.86
PVT1-218ENST00000523328 ERCC6LQ2NKX8 1250 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 METTL25Q8N6Q8 603 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 OR5M1Q8NGP8 315 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 HBEGFQ99075 208 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 RTN4RQ9BZR6 473 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 XPR1Q9UBH6 696 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 ZNF225Q9UK10 706 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 TMCO1Q9UM00 188 aa20.42■□□□□ 0.86
PVT1-218ENST00000523328 H3BML4 177 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 LINC01387J3KSC0 135 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 FADS1O60427 444 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 PLOD3O60568 738 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 RBP1P09455 135 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 NR1H2P55055 460 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 MRPS22P82650 360 aaKnown RBP20.41■□□□□ 0.86
PVT1-218ENST00000523328 PSG6Q00889 435 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 OCRLQ01968 901 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 EXOC3L2Q2M3D2 409 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 ZNF611Q8N823 705 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 SPATA4Q8NEY3 305 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 OR7G2Q8NG99 324 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 PLSCR4Q9NRQ2 329 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 FLRT3Q9NZU0 649 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 MCM8Q9UJA3 840 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 SNX6Q9UNH7 406 aa20.41■□□□□ 0.86
PVT1-218ENST00000523328 CUBNO60494 3623 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 ESRRBO95718 433 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 OTCP00480 354 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 IL3P08700 152 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 PPP3CBP16298 524 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 UAP1Q16222 522 aaPredicted RBP20.4■□□□□ 0.86
PVT1-218ENST00000523328 STAC2Q6ZMT1 411 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 UHMK1Q8TAS1 419 aaKnown RBP20.4■□□□□ 0.86
PVT1-218ENST00000523328 ZNF483Q8TF39 744 aaPredicted RBP20.4■□□□□ 0.86
PVT1-218ENST00000523328 EXOSC8Q96B26 276 aaKnown RBP20.4■□□□□ 0.86
PVT1-218ENST00000523328 MTBPQ96DY7 904 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 TMEM204Q9BSN7 226 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 NMRK1Q9NWW6 199 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 VPS29Q9UBQ0 182 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 OR10H1Q9Y4A9 318 aa20.4■□□□□ 0.86
PVT1-218ENST00000523328 HS3ST1O14792 307 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 SMIM24O75264 130 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 TSPAN8P19075 237 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 MAGEA12P43365 314 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 CDH13P55290 713 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 RPS3AP61247 264 aaKnown RBP20.39■□□□□ 0.85
PVT1-218ENST00000523328 STX5Q13190 355 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 HEPHL1Q6MZM0 1159 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 SAMD14Q8IZD0 417 aaPredicted RBP20.39■□□□□ 0.85
PVT1-218ENST00000523328 C1GALT1C1Q96EU7 318 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 STMN4Q9H169 189 aaPredicted RBP20.39■□□□□ 0.85
PVT1-218ENST00000523328 PTGES2Q9H7Z7 377 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 TAS2R9Q9NYW1 312 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 ABCG2Q9UNQ0 655 aa20.39■□□□□ 0.85
PVT1-218ENST00000523328 UTP11Q9Y3A2 253 aaKnown RBP20.39■□□□□ 0.85
PVT1-218ENST00000523328 FCGR2AP12318 317 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 SLC6A8P48029 635 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 RAE1P78406 368 aaKnown RBP20.38■□□□□ 0.85
PVT1-218ENST00000523328 C2orf54Q08AI8 447 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 TCHHL1Q5QJ38 904 aaPredicted RBP20.38■□□□□ 0.85
PVT1-218ENST00000523328 GGNQ86UU5 652 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 MAPK1IP1LQ8NDC0 245 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 OR6K3Q8NGY3 331 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 GFM2Q969S9 779 aaKnown RBP20.38■□□□□ 0.85
PVT1-218ENST00000523328 PLPPR2Q96GM1 343 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 SLC35C2Q9NQQ7 365 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 SDHAF3Q9NRP4 125 aa20.38■□□□□ 0.85
PVT1-218ENST00000523328 AP4B1Q9Y6B7 739 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms