RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TSPAN2O60636 221 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 NTN1O95631 604 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 CPMP14384 443 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 SERPINB1P30740 379 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 BSGP35613 385 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 HSPA7P48741 367 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 VPS41P49754 854 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 XKP51811 444 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 ARFIP1P53367 373 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 LGALS3BPQ08380 585 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 GANABQ14697 944 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 PRICKLE4Q2TBC4 344 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 MED27Q6P2C8 311 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 B3GLCTQ6Y288 498 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 Q6ZSR9 355 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 NKAPQ8N5F7 415 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 MCUQ8NE86 351 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 OR4K14Q8NGD5 310 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 OR10D3Q8NH80 312 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 UBE2E3Q969T4 207 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 RADILQ96JH8 1075 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 ADGRG7Q96K78 797 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 LRRC1Q9BTT6 524 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 CNOT10Q9H9A5 744 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 MAT2BQ9NZL9 334 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 MED11Q9P086 117 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 CORO1CQ9ULV4 474 aaPredicted RBP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 PLLPQ9Y342 182 aa12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
NKX3-1-202ENST00000523261 STK16O75716 305 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 CBX7O95931 251 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 ADAP00813 363 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 COL6A2P12110 1019 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 EMDP50402 254 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 FABP6P51161 128 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 MAP4K2Q12851 820 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 ITGADQ13349 1161 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 DDX39BQ13838 428 aaKnown RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 EFR3AQ14156 821 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF460Q14592 562 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 PPA1Q15181 289 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 IQCCQ4KMZ1 466 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 CYP20A1Q6UW02 462 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 BHLHA15Q7RTS1 189 aaPredicted RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 GALNT10Q86SR1 603 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 TCAIMQ8N3R3 496 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 ANKRD49Q8WVL7 239 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 CENPKQ9BS16 269 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 BRINP2Q9C0B6 783 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 METTL17Q9H7H0 456 aaPredicted RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 DDX31Q9H8H2 851 aaKnown RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 SMYD2Q9NRG4 433 aa12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 GPR55Q9Y2T6 319 aaPredicted RBP12.26□□□□□ -0.45
NKX3-1-202ENST00000523261 GOLGA6L22H0YM25 854 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 TRIM77I1YAP6 450 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 SCO2O43819 266 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 CXCL13O43927 109 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 RGS9O75916 674 aaPredicted RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 STK11Q15831 433 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 TMEM44Q2T9K0 475 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 NUFIP2Q7Z417 695 aaKnown RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 HUS1BQ8NHY5 278 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 KCTD4Q8WVF5 259 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 C1GALT1C1Q96EU7 318 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 BTBD9Q96Q07 612 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 RBM4Q9BWF3 364 aaKnown RBP12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 POU2F3Q9UKI9 436 aa12.25□□□□□ -0.45
NKX3-1-202ENST00000523261 LOC390937A0A1W2PQ73 354 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 LRP5LA4QPB2 252 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 SHISA8B8ZZ34 492 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 SYNGR4O95473 234 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 CT45A8P0DMV1 189 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 CT45A9P0DMV2 189 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 PGAM1P18669 254 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 PIK3CBP42338 1070 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 ARFIP2P53365 341 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 HILS1P60008 231 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 SPOCK1Q08629 439 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 CT45A2Q5DJT8 189 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 TEDDM1Q5T9Z0 273 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF544Q6NX49 715 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 SLC22A25Q6T423 547 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 LARP4Q71RC2 724 aaKnown RBP eCLIP12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 OR52R1Q8NGF1 315 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 MTERF1Q99551 399 aaKnown RBP12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 PAQR5Q9NXK6 330 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms