RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ADIPOR1Q96A54 375 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 IMMP1LQ96LU5 166 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF607Q96SK3 696 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 MESP1Q9BRJ9 268 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 GPN2Q9H9Y4 310 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 DCAF13Q9NV06 445 aaKnown RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF223Q9UK11 482 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 RPS6KA6Q9UK32 745 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 KLK13Q9UKR3 277 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 GPR55Q9Y2T6 319 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 AK5Q9Y6K8 562 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 NSG1A0A0A6YYJ2 146 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 DHRS12A0PJE2 317 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 TO15178 435 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 ACOX3O15254 700 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 KIAA0513O60268 411 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 ENTPD5O75356 428 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 NME6O75414 186 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 GCM2O75603 506 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 H6PDO95479 791 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 HPP00738 406 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 SERPINA1P01009 418 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 DRD5P21918 477 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 PSMA4P25789 261 aaKnown RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 OTX2P32243 289 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 GABRA3P34903 492 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 PIGAP37287 484 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 RNF4P78317 190 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 RIPK1Q13546 671 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CYP27C1Q4G0S4 372 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 HLA-DQA1Q5Y7H0 255 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 FRRS1Q6ZNA5 592 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 CBLL1Q75N03 491 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 MRGPREQ86SM8 312 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 KRT73Q86Y46 540 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 SLC44A2Q8IWA5 706 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 ZSCAN1Q8NBB4 408 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 RASSF5Q8WWW0 418 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 HSPBAP1Q96EW2 488 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 LCORQ96JN0 433 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 TREX2Q9BQ50 279 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 SPATA5L1Q9BVQ7 753 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 RUBCNLQ9H714 662 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-205ENST00000522240 AHCTF1Q8WYP5 2266 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
CPNE3-205ENST00000522240 TRBV11-1A0A0K0K1C0 115 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 GXYLT2A0PJZ3 443 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 MGRN1O60291 552 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 STX11O75558 287 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 KCNK2O95069 426 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 AQP1P29972 269 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 LCN1P31025 176 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 CRYBA2P53672 197 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 AP2B1P63010 937 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 MRPS22P82650 360 aaKnown RBP12.08□□□□□ -0.48
CPNE3-205ENST00000522240 IL10RAQ13651 578 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 BTBD16Q32M84 506 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-205ENST00000522240 ADGRG5Q8IZF4 528 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF619Q8N2I2 560 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 FAM110BQ8TC76 370 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 ADAMTS17Q8TE56 1095 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 PIK3R3Q92569 461 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 GATA6Q92908 595 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-205ENST00000522240 GAL3ST4Q96RP7 486 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 SDF2Q99470 211 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 G6PC3Q9BUM1 346 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 NXF5Q9H1B4 397 aaKnown RBP12.08□□□□□ -0.48
CPNE3-205ENST00000522240 MAGIXQ9H6Y5 334 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 ADPRHL2Q9NX46 363 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 ANAPC2Q9UJX6 822 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 MRTO4Q9UKD2 239 aaKnown RBP12.08□□□□□ -0.48
CPNE3-205ENST00000522240 CBLCQ9ULV8 474 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 OR10H1Q9Y4A9 318 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 FREM2Q5SZK8 3169 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 NBEAQ8NFP9 2946 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 WDFY3Q8IZQ1 3526 aa12.08□□□□□ -0.48
CPNE3-205ENST00000522240 SERPINB7O75635 380 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 ZFAND5O76080 213 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms