RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MT-ND2P03891 347 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 S1PR1P21453 382 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 RPS4Y1P22090 263 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 GABRA3P34903 492 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CNR2P34972 360 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 GPR3P46089 330 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ARRB1P49407 418 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 POU6F2P78424 691 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ST3GAL3Q11203 375 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 COX10Q12887 443 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 KCNAB1Q14722 419 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 TRAM2Q15035 370 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 AMZ1Q400G9 498 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CD300LDQ6UXZ3 194 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 AHSA2Q719I0 299 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ZER1Q7Z7L7 766 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 PLXDC1Q8IUK5 500 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 SVOPQ8N4V2 548 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 METTL27Q8N6F8 245 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 FKBP10Q96AY3 582 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 COG8Q96MW5 612 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ALOXE3Q9BYJ1 711 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 NAA50Q9GZZ1 169 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CENPVL1A0A0U1RR11 272 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 KIAA0513O60268 411 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 MPZL2O60487 215 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 NOL3O60936 208 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 SOX30O94993 753 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 INMTO95050 263 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 SOX14O95416 240 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 DBIP07108 87 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 MMP11P24347 488 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 TRHRP34981 398 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 DHPSP49366 369 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 ARL4DP49703 201 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 TMBIM6P55061 237 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 EEF1A1P68104 462 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 HSD11B2P80365 405 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 CFHR1Q03591 330 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 SHBQ15464 509 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 C1orf94Q6P1W5 598 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 OR51Q1Q8NH59 317 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 SIGLEC11Q96RL6 698 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 ANKRD19PQ9H560 264 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 SEMA4GQ9NTN9 838 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 PSORS1C1Q9UIG5 152 aa17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 TMEM184BQ9Y519 407 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-210ENST00000521667 GXYLT2A0PJZ3 443 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 H3BN98 237 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 M0R129 80 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 CD1CP29017 333 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MAP2K4P45985 399 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 SEPHS1P49903 392 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 GP2P55259 537 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 HSD17B7P56937 341 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 BTG2P78543 158 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 GPLD1P80108 840 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 HOXC5Q00444 222 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 BNC1Q01954 994 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 ROR2Q01974 943 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 ALDH6A1Q02252 535 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MVKQ03426 396 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 NR1D2Q14995 579 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MAPK14Q16539 360 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 ENTPD8Q5MY95 495 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 SLX4IPQ5VYV7 408 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 FIGNL1Q6PIW4 674 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 PLEKHM3Q6ZWE6 761 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 Q8N9G6 341 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 RORBQ92753 470 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 PMM1Q92871 262 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 DGAT2Q96PD7 388 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MCHR1Q99705 422 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 COPS4Q9BT78 406 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 LMF2Q9BU23 707 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 POLE3Q9NRF9 147 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 FBXO34Q9NWN3 711 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 SLC6A14Q9UN76 642 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 CLDN16Q9Y5I7 305 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 A0A087WUU8 490 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 CLCA1A8K7I4 914 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 ZNF749O43361 778 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 OR2B3O76000 313 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 IGFBP1P08833 259 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 GNSP15586 552 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MASP1P48740 699 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 LSM11P83369 360 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■□ 22.6
TRAPPC9-210ENST00000521667 PTCHD4Q6ZW05 846 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 FOLH1BQ9HBA9 442 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 C11orf16Q9NQ32 467 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 ENAMQ9NRM1 1142 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 CUTCQ9NTM9 273 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 WARS2Q9UGM6 360 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 NDOR1Q9UHB4 597 aa17.18■□□□□ 0.34
TRAPPC9-210ENST00000521667 MN1Q10571 1320 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-210ENST00000521667 TMEM150CB9EJG8 249 aa17.17■□□□□ 0.34
TRAPPC9-210ENST00000521667 H3BMH7 237 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms