RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 KDM8Q8N371 416 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 HDDC3Q8N4P3 179 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF148Q8N7C7 305 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 OR56B1Q8NGI3 324 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 LHX4Q969G2 390 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 PIWIL1Q96J94 861 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 UBXN6Q9BZV1 441 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF41Q9H4P4 317 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SEC14L4Q9UDX3 406 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SPATA31E1Q6ZUB1 1445 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 CASZ1Q86V15 1759 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 NUP188Q5SRE5 1749 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 XRN1Q8IZH2 1706 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 TNS1Q9HBL0 1735 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 TRAV9-2A0A087WT02 112 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 CCT8L1PA6NM43 557 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 H0YL77 283 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 LRRTM2O43300 516 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 STAM2O75886 525 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ECDO95905 644 aaPredicted RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM200BP0CF97 657 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 TAF6P49848 677 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 CDKL1Q00532 357 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 GABPB1Q06547 395 aaPredicted RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 PDIA5Q14554 519 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ACSF3Q4G176 576 aaPredicted RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 TAF3Q5VWG9 929 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 REP15Q6BDI9 236 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 HPS6Q86YV9 775 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 CCDC36Q8IYA8 594 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 MLKLQ8NB16 471 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 COLGALT1Q8NBJ5 622 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 LEMD2Q8NC56 503 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 CNNM3Q8NE01 707 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 CRYGNQ8WXF5 182 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 TOMM40LQ969M1 308 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 MCCC1Q96RQ3 725 aaPredicted RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 TSPY26PQ9H489 355 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM124BQ9H5Z6 455 aaPredicted RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 GPR83Q9NYM4 423 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ZNF581Q9P0T4 197 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 PURGQ9UJV8 347 aaKnown RBP3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ODF2LQ9ULJ1 636 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 ADAMTS13Q76LX8 1427 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 METP08581 1390 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 PLEKHG1Q9ULL1 1385 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 RREB1Q92766 1687 aa3.49□□□□□ -1.85
CTNNA1-222ENST00000520400 MYOM2P54296 1465 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 ITSN1Q15811 1721 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 ADGRB2O60241 1585 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF103-CHMP3A0A140T963 221 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF222A6NCQ9 220 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 C19orf81C9J6K1 198 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 PDE5AO76074 875 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 GOT2P00505 430 aaKnown RBP3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 CCDC192P0DO97 292 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 CHRNA3P32297 505 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 MATKP42679 507 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 IST1P53990 364 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 MFAP2P55001 183 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 IL23RQ5VWK5 629 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 APOOLQ6UXV4 268 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 UBE2Q2Q8WVN8 375 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 DLX4Q92988 240 aaPredicted RBP3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 ADIPOR1Q96A54 375 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 PYGO2Q9BRQ0 406 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 KRT23Q9C075 422 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 CCSER1Q9C0I3 900 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 TMEM231Q9H6L2 316 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 NGBQ9NPG2 151 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM114A2Q9NRY5 505 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 HOMER3Q9NSC5 361 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 CENPMQ9NSP4 180 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 CLEC5AQ9NY25 188 aa3.48□□□□□ -1.85
CTNNA1-222ENST00000520400 FMN2Q9NZ56 1722 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 ABCC4O15439 1325 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 PIK3C2GO75747 1445 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 RAI1Q7Z5J4 1906 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 IGHV3OR16-12A0A075B7B8 117 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 IGKV3D-20A0A0C4DH25 116 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 ZNF487B1APH4 448 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 PDLIM1O00151 329 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 BCL2L11O43521 198 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 SRPX2O60687 465 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 TSC22D2O75157 780 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 APBB3O95704 486 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 HOXB7P09629 217 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 GP9P14770 177 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 IDSP22304 550 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 MAPK3P27361 379 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 ELK3P41970 407 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 MAGEA4P43358 317 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 SLC22A6Q4U2R8 563 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 MS4A13Q5J8X5 152 aa3.47□□□□□ -1.85
CTNNA1-222ENST00000520400 ZNF774Q6NX45 483 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms