RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 LINC00469Q8N7U9 141 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 ASCC1Q8N9N2 400 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 STXBP6Q8NFX7 210 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 OR5M9Q8NGP3 310 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 RDH11Q8TC12 318 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 SCARB1Q8WTV0 552 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 NRGNQ92686 78 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 C18orf25Q96B23 403 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 SGK3Q96BR1 496 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 ABHD8Q96I13 439 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 SLC38A2Q96QD8 506 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 C19orf43Q9BQ61 176 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 NEURL2Q9BR09 285 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 LLPHQ9BRT6 129 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 TTYH2Q9BSA4 534 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 RPP25Q9BUL9 199 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 SPATA16Q9BXB7 569 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 TEKT3Q9BXF9 490 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 APOBEC3GQ9HC16 384 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 TREM1Q9NP99 234 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 SLC7A7Q9UM01 511 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 POLDIP2Q9Y2S7 368 aa4.98□□□□□ -1.61
CTNNA1-202ENST00000517533 ATP10AO60312 1499 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PPIAL4EA0A075B759 164 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ASPDHA6ND91 283 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 GLTPD2A6NH11 291 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 C12orf71A8MTZ7 269 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ANHXE9PGG2 379 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 DLGAP1O14490 977 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MBP02144 154 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 LYNP07948 512 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PPIAL4FP0DN26 164 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ANXA3P12429 323 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MSR1P21757 451 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 HPCAL1P37235 193 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 BRCC3P46736 316 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 BACE1P56817 501 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 OC90Q02509 493 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 C1orf61Q13536 156 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PEX6Q13608 980 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ZNF829Q3KNS6 432 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 SBK1Q52WX2 424 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 SFT2D3Q587I9 215 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 Q6ZRG5 221 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 NET1Q7Z628 596 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 SERPINA9Q86WD7 417 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 KMT5CQ86Y97 462 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 TGIF2LXQ8IUE1 241 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 DCP1BQ8IZD4 617 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 SYCE1Q8N0S2 351 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 CENPSQ8N2Z9 138 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ELMOD1Q8N336 334 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 TRIML2Q8N7C3 387 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MFSD9Q8NBP5 474 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 OR4C5Q8NGB2 326 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ASZ1Q8WWH4 475 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MYLPFQ96A32 169 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MRPL24Q96A35 216 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PPP1R16AQ96I34 528 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ADGRG7Q96K78 797 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 C12orf42Q96LP6 360 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 TSNARE1Q96NA8 513 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ZNF385AQ96PM9 386 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 COPS8Q99627 209 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 DCTN5Q9BTE1 182 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 FUCA2Q9BTY2 467 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PARD6BQ9BYG5 372 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ALG9Q9H6U8 611 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MTHFD2LQ9H903 347 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 S100A14Q9HCY8 104 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 ECHDC1Q9NTX5 307 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MED17Q9NVC6 651 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 MTCH1Q9NZJ7 389 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PITPNC1Q9UKF7 332 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 IKZF3Q9UKT9 509 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 PPIAL4AQ9Y536 164 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 TIMM10BQ9Y5J6 103 aa4.97□□□□□ -1.61
CTNNA1-202ENST00000517533 FAM74A7A6NL05 159 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 A8MU76 341 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 PSMD11O00231 422 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 XPNPEP2O43895 674 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 TPST2O60704 377 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 ANXA9O76027 345 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 H6PDO95479 791 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 YEATS4O95619 227 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 GAPDHP04406 335 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 ALPLP05186 524 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 ATP1B2P14415 290 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 GSTM3P21266 225 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 UGT1A5P35504 534 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 RAB11AP62491 216 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 SLAQ13239 276 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 SNTA1Q13424 505 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 RAB11BQ15907 218 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 MRPL23Q16540 153 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 DUSP5Q16690 384 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 FAM83EQ2M2I3 478 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 TMEM52BQ4KMG9 183 aa4.96□□□□□ -1.62
CTNNA1-202ENST00000517533 FAM74A3Q4VXF1 159 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms