RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 EURLQ9NYK6 297 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 HMGXB4Q9UGU5 601 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 IL36AQ9UHA7 158 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 PHF11Q9UIL8 331 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 POLDIP2Q9Y2S7 368 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 STARD10Q9Y365 291 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TCAF1Q9Y4C2 921 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 PCDHGB1Q9Y5G3 927 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 KPTNQ9Y664 436 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MAD1L1Q9Y6D9 718 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 AFF2P51816 1311 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 C1orf232A0A0U1RR37 186 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 SMCO2A6NFE2 343 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 A8MUA0 341 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 A8MVM7 634 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 RFXAPO00287 272 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 FBP2O00757 339 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR7A17O14581 309 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 LATO43561 262 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 SCN2BO60939 215 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ITGB2P05107 769 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ACAA1P09110 424 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF853P0CG23 659 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 UBCP0CG48 685 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADORA3P0DMS8 318 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 DARSP14868 501 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 POLR2CP19387 275 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 EIF2S2P20042 333 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 STOMP27105 288 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 UGT1A5P35504 534 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 AHRP35869 848 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 BRCC3P46736 316 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 RFX3P48380 749 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 STX17P56962 302 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 PITX1P78337 314 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDKL1Q00532 357 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CNTN1Q12860 1018 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 C1orf61Q13536 156 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBM39Q14498 530 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 EZH2Q15910 746 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC35D3Q5M8T2 416 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF470Q6ECI4 717 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR52W1Q6IF63 320 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 TCEAL6Q6IPX3 200 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 Q71RC1 249 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRPL21Q7Z2W9 205 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPR142Q7Z601 462 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 TRIM69Q86WT6 500 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM17Q86X19 198 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 HPS6Q86YV9 775 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CCDC50Q8IVM0 306 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDKL3Q8IVW4 592 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ELMOD1Q8N336 334 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR7G1Q8NGA0 311 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR5M9Q8NGP3 310 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 RDH11Q8TC12 318 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CA5BP1Q8WTZ4 195 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 CCDC124Q96CT7 223 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 SCRN2Q96FV2 425 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 FOXN4Q96NZ1 517 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADOQ96SZ5 270 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 TUBGCP2Q9BSJ2 902 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 MCRIP2Q9BUT9 160 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM49AQ9H0Q0 323 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 NXF5Q9H1B4 397 aaKnown RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 OPN3Q9H1Y3 402 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 HIPK2Q9H2X6 1198 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 UCK1Q9HA47 277 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADAP2Q9NPF8 381 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ASB6Q9NWX5 421 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 MS4A12Q9NXJ0 267 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM53CQ9NYF3 392 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 IL36GQ9NZH8 169 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 KLRF1Q9NZS2 232 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADAM22Q9P0K1 906 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 STOX2Q9P2F5 926 aaPredicted RBP3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 POLKQ9UBT6 870 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 SIX4Q9UIU6 781 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF229Q9UJW7 825 aa3.54□□□□□ -1.84
RNU4-60P-201ENST00000517239 PDS5AQ29RF7 1337 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 WDR17Q8IZU2 1322 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GSTTP1A0A1W2PQM5 241 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 FRG2CA6NGY1 282 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SERINC4A6NH21 518 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NPIPA7E9PJI5 369 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GOLGA8RI6L899 631 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PRRG2O14669 202 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MID1O15344 667 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 HDAC3O15379 428 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SRPX2O60687 465 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SCELO95171 688 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CLDN9O95484 217 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 P04436 131 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 FCER2P06734 321 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SERPINE2P07093 398 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NHLRC4P0CG21 123 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms