RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 MCHR2Q969V1 340 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 RSF1Q96T23 1441 aaPredicted RBP-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 SULT4A1Q9BR01 284 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 ZNF717Q9BY31 904 aaPredicted RBP-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 DCTPP1Q9H773 170 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 XAB2Q9HCS7 855 aaKnown RBP-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 EMCNQ9ULC0 261 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 RUVBL2Q9Y230 463 aaKnown RBP-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 ATG4BQ9Y4P1 393 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 PCDHGA1Q9Y5H4 931 aa-1.02□□□□□ -2.57
SNORA40.13-201ENST00000516379 LOC100509620A0A075B734 347 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 SULT2B1O00204 365 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 CTDSP2O14595 271 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 CABYRO75952 493 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 TBX18O95935 607 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 XBP1P17861 261 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 VDAC1P21796 283 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 AQP1P29972 269 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 P2RY14Q15391 338 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 CAMK4Q16566 473 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 RAB41Q5JT25 222 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 ALKBH5Q6P6C2 394 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 WDR49Q8IV35 697 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 THEM5Q8N1Q8 247 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 CNNM3Q8NE01 707 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 OR52I1Q8NGK6 324 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 OR2A12Q8NGT7 310 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 EXOSC8Q96B26 276 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 SLC39A13Q96H72 371 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 TSSK2Q96PF2 358 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 TAAR1Q96RJ0 339 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 GPR174Q9BXC1 333 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 ITPAQ9BY32 194 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 ZNF355PQ9NSJ1 428 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 OLAHQ9NV23 265 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 HAO2Q9NYQ3 351 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 OR1A1Q9P1Q5 309 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 DDX25Q9UHL0 483 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 SIGLEC9Q9Y336 463 aa-1.03□□□□□ -2.57
SNORA40.13-201ENST00000516379 ZFC3H1O60293 1989 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 A6NLC8 198 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 H0YL77 283 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF263O14978 683 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 RBFOX2O43251 390 aaKnown RBP eCLIP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SDC3O75056 442 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 CCNKO75909 580 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 AKAP3O75969 853 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 TSPAN8P19075 237 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 MAPK4P31152 587 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SAA4P35542 130 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 CDX1P47902 265 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 MRPL12P52815 198 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 HAND2P61296 217 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 CFAP221Q4G0U5 840 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 KLF17Q5JT82 389 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SPINT4Q6UDR6 99 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 BTNL8Q6UX41 500 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 TLK2Q86UE8 772 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ITIH5Q86UX2 942 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 C15orf56Q8N910 161 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 NPBQ8NG41 125 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 GOLGA5Q8TBA6 731 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SAP25Q8TEE9 199 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 MRPS27Q92552 414 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF607Q96SK3 696 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 PKMYT1Q99640 499 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 PRMT1Q99873 361 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ZNF559Q9BR84 538 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 CNOT10Q9H9A5 744 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SGK2Q9HBY8 427 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 FAM212BQ9NTI7 297 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 SUCLA2Q9P2R7 463 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 CHORDC1Q9UHD1 332 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 PTRH2Q9Y3E5 179 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ETV7Q9Y603 341 aa-1.04□□□□□ -2.58
SNORA40.13-201ENST00000516379 ACSL4O60488 711 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 TSPAN2O60636 221 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 PDE5AO76074 875 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 IL4P05112 153 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 NTSP30990 170 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 CCR4P51679 360 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 CDC20Q12834 499 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 PPP2R5CQ13362 524 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 C15orf59Q2T9L4 293 aaPredicted RBP-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 PARP10Q53GL7 1025 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 MEDAGQ5VYS4 303 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 CHST3Q7LGC8 479 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 C17orf64Q86WR6 236 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 POGLUT1Q8NBL1 392 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 OR5W2Q8NH69 310 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 VPS39Q96JC1 886 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 LRRC3BQ96PB8 259 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 RNF157Q96PX1 679 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 RNF5Q99942 180 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 ABCG8Q9H221 673 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 L3MBTL1Q9Y468 752 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 C2orf16Q68DN1 1984 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 MUC12Q9UKN1 5478 aa-1.05□□□□□ -2.58
SNORA40.13-201ENST00000516379 TICRRQ7Z2Z1 1910 aa-1.06□□□□□ -2.58
SNORA40.13-201ENST00000516379 A0A0G2JN53 185 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms