RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FAM151BQ6UXP7 276 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 TMUB2Q71RG4 321 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CPXM2Q8N436 756 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CLDN19Q8N6F1 224 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CELF5Q8N6W0 485 aaKnown RBP12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 ASB12Q8WXK4 309 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CNOT9Q92600 299 aaKnown RBP12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SPON2Q9BUD6 331 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 GPN1Q9HCN4 374 aaPredicted RBP12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SLC22A14Q9Y267 594 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 RASD1Q9Y272 281 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SLC9A8Q9Y2E8 581 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CHST2Q9Y4C5 530 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 MAP4K5Q9Y4K4 846 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PRAMEF4O60810 478 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 IGHA1P01876 353 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 HIST1H2ABP04908 130 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 GPR15P49685 360 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PRMT2P55345 433 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 DEFA5Q01523 94 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PLD1Q13393 1074 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 HTR4Q13639 388 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 MICBQ29980 383 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PRAMEF9Q5VWM5 478 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 GRHL2Q6ISB3 625 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CDC73Q6P1J9 531 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PGAP1Q75T13 922 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 HIST3H2AQ7L7L0 130 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 TRMT11Q7Z4G4 463 aaKnown RBP12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SLC9B2Q86UD5 537 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 LHFPL3Q86UP9 236 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 PAQR7Q86WK9 346 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SCN4BQ8IWT1 228 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 TRMT10AQ8TBZ6 339 aaKnown RBP12.06□□□□□ -0.48
SMAD1-215ENST00000515385 DNAJB3Q8WWF6 145 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 HIST1H2ACQ93077 130 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 ORAI1Q96D31 301 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CRLS1Q9UJA2 301 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 FBXL3Q9UKT7 428 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 CAMK2AQ9UQM7 478 aa12.06□□□□□ -0.48
SMAD1-215ENST00000515385 SNRPGP15A8MWD9 76 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 GAPDHSO14556 408 aaPredicted RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 SYN3O14994 580 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 KDM4BO94953 1096 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 SERPIND1P05546 499 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 CD3GP09693 182 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 OR12D1P0DN82 309 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 POU3F2P20265 443 aaPredicted RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 PSMB1P20618 241 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 ATP5A1P25705 553 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 CSKP41240 450 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 CDH4P55283 916 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 AP3S2P59780 193 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 PSMA6P60900 246 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 KRT33BQ14525 404 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 HFEQ30201 348 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 C1orf94Q6P1W5 598 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 PXT1Q8NFP0 134 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 HAVCR2Q8TDQ0 301 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 GNPDA2Q8TDQ7 276 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 SETD7Q8WTS6 366 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 TCEAL4Q96EI5 215 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 ZNF354BQ96LW1 612 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 MOGAT1Q96PD6 335 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 BBS4Q96RK4 519 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 TREX2Q9BQ50 279 aaPredicted RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 TEX12Q9BXU0 123 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 CHIAQ9BZP6 476 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 ESRP2Q9H6T0 727 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 ADARB2Q9NS39 739 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 NLGN3Q9NZ94 848 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 PCDHGA9Q9Y5G4 932 aaKnown RBP12.05□□□□□ -0.48
SMAD1-215ENST00000515385 NPFFR2Q9Y5X5 522 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 GREB1Q4ZG55 1949 aa12.05□□□□□ -0.48
SMAD1-215ENST00000515385 GNG14A0A1W2PPG7 69 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 CASTOR2A6NHX0 329 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 PGRMC2O15173 223 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 MID1O15344 667 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 MT-ND4P03905 459 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 IL5P05113 134 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 SAGP10523 405 aaPredicted RBP12.04□□□□□ -0.48
SMAD1-215ENST00000515385 UQCRC2P22695 453 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 STAT5AP42229 794 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 NSG1P42857 185 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 STARP49675 285 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 PNLIPRP1P54315 467 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 CASP9P55211 416 aa12.04□□□□□ -0.48
SMAD1-215ENST00000515385 CDH11P55287 796 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms