RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SELENOMQ8WWX9 145 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 TESK2Q96S53 571 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 TBC1D10AQ9BXI6 508 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 IKZF5Q9H5V7 419 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 ECT2Q9H8V3 914 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 SENP1Q9P0U3 644 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 ATXN10Q9UBB4 475 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 ABCD2Q9UBJ2 740 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 DUSP12Q9UNI6 340 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 MGAT4BQ9UQ53 548 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 AGRNO00468 2067 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 NCAPD2Q15021 1401 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 LRRC30A6NM36 301 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 ANKRD30BLA7E2S9 258 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 C19orf81C9J6K1 198 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 F8WDY8 70 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 CHADO15335 359 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 DUSP14O95147 198 aaKnown RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 TRIM16O95361 564 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 JCHAINP01591 159 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 IGFBP1P08833 259 aaPredicted RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 GSTT2P0CG29 244 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 GSTT2BP0CG30 244 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 SDC1P18827 310 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 ACVR1BP36896 505 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 MDH2P40926 338 aaKnown RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 IL9RQ01113 521 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 PEX6Q13608 980 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 DPYSQ14117 519 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 ZNF57Q68EA5 555 aaPredicted RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 ERICH1Q86X53 443 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 SPAG16Q8N0X2 631 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 RPAP3Q9H6T3 665 aaPredicted RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 VAT1LQ9HCJ6 419 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 PRR34Q9NV39 138 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 C1orf123Q9NWV4 160 aa3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 MTF2Q9Y483 593 aaPredicted RBP3.81□□□□□ -1.8
HMGCS1-207ENST00000514610 CUX2O14529 1486 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 PPIHO43447 177 aaKnown RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 VPS26AO75436 327 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 PAICSP22234 425 aaKnown RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 GDF1P27539 372 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 ADRA1AP35348 466 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 CYLC1P35663 651 aaPredicted RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 FNTAP49354 379 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 GPC3P51654 580 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 SLC25A1P53007 311 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 HSF2Q03933 536 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 CYBRD1Q53TN4 286 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 PAN3Q58A45 887 aaKnown RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 MARC1Q5VT66 337 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 LHFPL4Q7Z7J7 247 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 MISPQ8IVT2 679 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 EFCAB13Q8IY85 973 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 GPD1LQ8N335 351 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 ADAMTS16Q8TE57 1224 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 SIGLEC12Q96PQ1 595 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 TMEM121Q9BTD3 319 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 OPN3Q9H1Y3 402 aaPredicted RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 MIEF1Q9NQG6 463 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 EXOSC3Q9NQT5 275 aaKnown RBP3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 ELOVL2Q9NXB9 296 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 TAS2R3Q9NYW6 316 aa3.8□□□□□ -1.8
HMGCS1-207ENST00000514610 GRIN2DO15399 1336 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 ATP8B3O60423 1300 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 IGLV3-10A0A075B6K4 115 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 FAM168BA1KXE4 195 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 WASHC1A8K0Z3 465 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 FAM220BPB1ANY3 271 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 WASH3PC4AMC7 463 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 CASKO14936 926 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 GPAA1O43292 621 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 LATO43561 262 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 RAMP1O60894 148 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 XRCC1P18887 633 aaPredicted RBP3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 PTBP1P26599 531 aaKnown RBP eCLIP3.79□□□□□ -1.81e-9■■□□□ 12.9
HMGCS1-207ENST00000514610 RPL4P36578 427 aaKnown RBP3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 PTGFRP43088 359 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 MTTPP55157 894 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 HTD2P86397 168 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 PLOD1Q02809 727 aaPredicted RBP3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 PUDPQ08623 228 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 INAQ16352 499 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 KRT71Q3SY84 523 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 WASH2PQ6VEQ5 465 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 TMEM184AQ6ZMB5 413 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 STAC2Q6ZMT1 411 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 GPR65Q8IYL9 337 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 ANKRD20A12PQ8NF67 263 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 TADA1Q96BN2 335 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 UPRTQ96BW1 309 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 VSIG2Q96IQ7 327 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 VSTM2LQ96N03 204 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 DEFB126Q9BYW3 111 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 TNFRSF19Q9NS68 423 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 RBM28Q9NW13 759 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms