RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ENPP6Q6UWR7 440 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 ZNF551Q7Z340 670 aaPredicted RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 TMEM200AQ86VY9 491 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 HOMEZQ8IX15 550 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 C9orf106Q8NAJ2 232 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 TWIST2Q8WVJ9 160 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 RNASE6Q93091 150 aaKnown RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 GFM2Q969S9 779 aaKnown RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 CIDECQ96AQ7 238 aaPredicted RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 TSSK3Q96PN8 268 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 ROPN1BQ9BZX4 212 aaPredicted RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 REEP4Q9H6H4 257 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 ROPN1Q9HAT0 212 aaPredicted RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 Q9N2J8 555 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 FAM120CQ9NX05 1096 aaKnown RBP9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 FLRT3Q9NZU0 649 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 JKAMPQ9P055 326 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 PPP4R1LQ9P1A2 415 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 CLCF1Q9UBD9 225 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 DKKL1Q9UK85 242 aa9.49□□□□□ -0.89
HMGXB3-205ENST00000514469 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 PIP5K1BO14986 540 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 HCRTR2O43614 444 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 SCO2O43819 266 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZIC3O60481 467 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 SPAG7O75391 227 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZWINTO95229 277 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 IL18BPO95998 194 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 FGF4P08620 206 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 LINC00032P0C843 101 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZNF708P17019 499 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 CHMP24386 653 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 CTSSP25774 331 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 DPP4P27487 766 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 UQCRC1P31930 480 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ARRB2P32121 409 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 OPRM1P35372 400 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 SERPINB5P36952 375 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 MAP3K8P41279 467 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 PSMD4P55036 377 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 DSCR4P56555 118 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 GANABQ14697 944 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 XKR7Q5GH72 579 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ARL13AQ5H913 290 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 OR5M10Q6IEU7 315 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 WDR93Q6P2C0 686 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZCCHC23Q6ZST2 131 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 TRIM42Q8IWZ5 723 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 DDIASQ8IXT1 998 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 OR2M3Q8NG83 312 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 OR4K17Q8NGC6 315 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 CLHC1Q8NHS4 586 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZFP28Q8NHY6 868 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 PPCDCQ96CD2 204 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 MTERF3Q96E29 417 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZBED6CLQ96FA7 236 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 LRRC46Q96FV0 321 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 SFXN2Q96NB2 322 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ZFP3Q96NJ6 502 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 SFXN3Q9BWM7 321 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ACSS1Q9NUB1 689 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 NTMQ9P121 344 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 FOXD3Q9UJU5 478 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 MRTO4Q9UKD2 239 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 TRAF6Q9Y4K3 522 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 KIAA1549Q9HCM3 1950 aa9.48□□□□□ -0.89
HMGXB3-205ENST00000514469 DNAJC13O75165 2243 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 ANKRD17O75179 2603 aaKnown RBP9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 GXYLT2A0PJZ3 443 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 FAM221AA4D161 298 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 AKAP10O43572 662 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 TYROBPO43914 113 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 NKX2-2O95096 273 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 RCBTB2O95199 551 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 IGKV1D-16P01601 117 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 PRPS2P11908 318 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 BCKDHAP12694 445 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 GPC1P35052 558 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 KIR2DL3P43628 341 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 ASMTP46597 345 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 STARP49675 285 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 SORDQ00796 357 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 SRYQ05066 204 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 SNTB1Q13884 538 aaKnown RBP9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 BCL2A1Q16548 175 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 GALNTL6Q49A17 601 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 MREGQ8N565 214 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 CDRT4Q8N9R6 151 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms