RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RPN2P04844 631 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 RNF224P0DH78 156 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ETFAP13804 333 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 PRF1P14222 555 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GTF2E2P29084 291 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 FEN1P39748 380 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GNPDA1P46926 289 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ASCL1P50553 236 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 LIPJQ5W064 366 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 MFSD12Q6NUT3 480 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 PARGQ86W56 976 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 AMIGO3Q86WK7 504 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ERICH1Q86X53 443 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GJC3Q8NFK1 279 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 M1APQ8TC57 530 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 HM13Q8TCT9 377 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZC3HAV1LQ96H79 300 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SH3YL1Q96HL8 342 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ABHD8Q96I13 439 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 HPDLQ96IR7 371 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 C3orf30Q96M34 536 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GFI1Q99684 422 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ABCB10Q9NRK6 738 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SH3PXD2BA1X283 911 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MGAT4DA6NG13 374 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 A8MU76 341 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CCL24O00175 119 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 AIM2O14862 343 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SRGAP3O43295 1099 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 DENRO43583 198 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 RCBTB2O95199 551 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 PPP3CBP16298 524 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 HOXB9P17482 250 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 NPR2P20594 1047 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 S100A1P23297 94 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 DCKP27707 260 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ITPKBP27987 946 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 OC90Q02509 493 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ITPK1Q13572 414 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 DNASE1L3Q13609 305 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ADGRE1Q14246 886 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 STX1AQ16623 288 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 BMT2Q1RMZ1 405 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 FAM174BQ3ZCQ3 159 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM200BQ69YZ2 307 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 VASNQ6EMK4 673 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 LARP4Q71RC2 724 aaKnown RBP eCLIP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CCDC185Q8N715 623 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR4C15Q8NGM1 316 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 FAM3CQ92520 227 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CIDECQ96AQ7 238 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 DACT3Q96B18 629 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CCDC124Q96CT7 223 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 COX4I2Q96KJ9 171 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TNFRSF13CQ96RJ3 184 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 FOXP1Q9H334 677 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TPK1Q9H3S4 243 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 COL5A3P25940 1745 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 A0A0G2JNJ9 132 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MROH6A6NGR9 719 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 GOLGA6L10A6NI86 522 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM114B3SHH9 223 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 RNF8O76064 485 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 NXPH2O95156 264 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 RNH1P13489 461 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ST6GAL1P15907 406 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 BMP7P18075 431 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 PMCHP20382 165 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 GIFP27352 417 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SSTR1P30872 391 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MAP3K8P41279 467 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MAGEA2P43356 314 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 HLCSP50747 726 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SPCS3P61009 180 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 IL9RQ01113 521 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MELKQ14680 651 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 XKR6Q5GH73 641 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 MTX3Q5HYI7 312 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 PRAMEF17Q5VTA0 474 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SPRED2Q7Z698 418 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 SCD5Q86SK9 330 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ADGRE4PQ86SQ3 457 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMPRSS6Q8IU80 811 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 TGS1Q96RS0 853 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 DCLRE1CQ96SD1 692 aaKnown RBP5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 PCGF1Q9BSM1 259 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ABCB9Q9NP78 766 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 INPP5EQ9NRR6 644 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 CTTNBP2NLQ9P2B4 639 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 Q9UFV3 132 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 ERGIC3Q9Y282 383 aa5.78□□□□□ -1.48
TRAPPC11-209ENST00000512476 NPIPA5A0A0B4J1W7 369 aa5.77□□□□□ -1.49
TRAPPC11-209ENST00000512476 A0A1W2PQD8 194 aa5.77□□□□□ -1.49
TRAPPC11-209ENST00000512476 NEMP2A6NFY4 417 aa5.77□□□□□ -1.49
TRAPPC11-209ENST00000512476 NPIPA5E9PKD4 350 aa5.77□□□□□ -1.49
TRAPPC11-209ENST00000512476 NPIPA3F8WFD2 350 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms